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Enhancement/adding unit testing#128

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rhassaine wants to merge 14 commits intonf-core:devnf-core/oncoanalyser:devfrom rhassaine:enhancement/adding-unit-testingrhassaine/oncoanalyser:enhancement/adding-unit-testingCopy head branch name to clipboard

+618-1

Commits

Commits on Feb 4, 2025

• Updated .gitignore file for testing purposes

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  a1e0987

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• Generated basic test cases for AMBER process in both tumor/normal & tumor-only mode

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• Removed additional logging from test

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• Latest AMBER test cases with updated nf-test pckg

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• Removed comments

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• Unit testing for COBALT

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• Added unit tests for AMBER (tumor + normal mode) & COBALT

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• Additional tests for tumor-only mode

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  a8d5e94

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• Indentation fix

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  31b1f1c

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• Updated .gitignore

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• Updated .gitignore w/ test-related files & dirs

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• Formatting issues

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• Added unit testing for sage somatic

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Commits on Feb 5, 2025

• Adding ISOFOX testing

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