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Road network distance #2

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@emlys emlys commented Aug 18, 2022

Description

Fixes #

Checklist

  • Updated HISTORY.rst (if these changes are user-facing)
  • Updated the user's guide (if needed)
  • Tested the affected models' UIs (if relevant)

emlys and others added 30 commits July 27, 2022 10:49
@emlys
include all dev requirements in rtd environment
1d9df34
@emlys
oops
7c1d40a
@davemfish
lots of debug statements. natcap#1040
e365b2e
@emlys
correct lfs fetch/checkout order in Makefile
e99bfb1
@dcdenu4
Merge pull request natcap#1035 from emlys/task/1031
8de180b 
Move static config into `pyproject.toml`
@emlys
Merge pull request natcap#1041 from natcap/main
ce99cfc 
Merge main into release/3.12
@davemfish
added test using coordinates from real data. natcap#1040.
4c21c68
@davemfish
note for history. natcap#1040.
b92a47c
@davemfish
minor update to docstring, function name. natcap#1040.
8bf0f73
@phargogh
Merge pull request natcap#1042 from davemfish/bugfix/CV-1040-landmass…
2d319ab 
…-intersection

Bugfix CV landmass-AOI intersection
@phargogh
Fixing LFS issue in Makefile fetch. RE:natcap#819
d322163
@phargogh
Adding a function to group features by a field.
f4b1c86 
Needed for zonal_statistics refactor of the statistics table. RE:natcap#819
@davemfish
Merge pull request natcap#1043 from natcap/main
df1f1a3 
Merge main into release/3.12
@phargogh
Removing function I won't use for now to group features together by a…
4173248 
… field. RE:natcap#819
@phargogh
Clarifying intent with numpy.sum instead of numpy.count_nonzero. RE:n…
38839d1 
…atcap#819
@phargogh
Setting ALL_TOUCHED=FALSE for consistency with remainder of function …
214ec93 
…and also with zonal_statistics.
@phargogh
Moving an inline comment about SRSs to the docstring in _align. RE:na…
ece1871 
…tcap#819
@phargogh
Updating docstring in _align about interpolation scheme. RE:natcap#819
157ad7f
@phargogh
Bumping a logging priority down to DEBUG. RE:natcap#819
80ca857
@phargogh
Adding a logging message about simplification starting. RE:natcap#819
f107433
@phargogh
Moving a few unit tests out of the model tests fixture.
ed49449
@phargogh
Removing a script to run HRA with the sample data.
6ea32cf
@phargogh
Merge branch 'main' of https://github.com/natcap/invest into bugfix/8…
01b1ddc 
…19-rewrite-hra

Conflicts:
	HISTORY.rst
	Makefile
@phargogh
Updating git UG repo rev to fix an issue with the sample data datasta…
48f7525 
…ck for HRA. RE:natcap#819
@phargogh
Reworking NDR equation 41 (effective retention) for UG consistency.
c41299a
@phargogh
Noting change in HISTORY in case it does make a difference in outputs.
911dcd0
@phargogh
Merge branch 'main' of https://github.com/natcap/invest into task/ref…
65c7921 
…ormat-ndr-effective-retention

Conflicts:
	HISTORY.rst
@emlys
bump gdal requirement >=3.4.2
da4eb94
@emlys
bump gdal requirement in RTD environment as well
74bd1b2
@phargogh @emlys
Update src/natcap/invest/ndr/ndr_core.pyx
2991717 
Renaming "downstream" --> "downslope".

Co-authored-by: Emily Soth <[email protected]>
phargogh and others added 30 commits December 13, 2022 09:45
@phargogh
Merge branch 'main' into bugfix/1080-hra-summary-statistcs-table-inco…
198ff29 
…rrect
@dcdenu4
I. natcap#1133 remove unecessary gis_type check
b601d25
@dcdenu4
I. natcap#1133 rework get_gis_type call
3703301
@dcdenu4
I. natcap#1133 simplify get_gis_type handling
aecef32
@dcdenu4
I. natcap#1133 bumping PGP version
96db291
@emlys
test for path expansion utilities
4145d92
@emlys
use os.sep for platform independent test
4867063
@emlys
try again
909e368
@phargogh
Bumping pygeoprocessing revision. RE:natcap#1080
e180cdb
@phargogh
Merge branch 'bugfix/1080-hra-summary-statistcs-table-incorrect' of g…
ef261ff 
…ithub.com:phargogh/invest into bugfix/1080-hra-summary-statistcs-table-incorrect
@dcdenu4
Merge pull request natcap#1128 from emlys/feature/1025
24a954b 
Centralize handling of absolute/relative paths in CSVs
@dcdenu4
Merge branch 'main' into task/1133-pgp-get-gis-type-change
c81205c
@phargogh
Removing history notes that had somehow been duplicated. RE:natcap#1080
395a757
@phargogh
Reworking summary table test to clarify intent.
edaa069 
I wasn't being clear about which classification arrays were affecting
which records in the tests.  This commit changes that by renaming a few
array variables, clarifying which values are derived from which arrays,
and adding a helper function to clearly derive values from arrays.

RE:natcap#1080
@phargogh
Renaming variables, adding a comment for clarity.
43a37ec 
RE:natcap#1080
@phargogh
Merge pull request natcap#1134 from dcdenu4/task/1133-pgp-get-gis-typ…
43d38d4 
…e-change

Update for new get_gis_type behavior
@davemfish
Merge pull request natcap#1083 from phargogh/bugfix/1080-hra-summary-…
99dc889 
…statistcs-table-incorrect

Correct HRA summary statistics table
@emlys
update sample data hash
cab96d0
@emlys
fix line missing quote in second release script
00c194b
@emlys
update user guide commit hash
d405c4d
@dcdenu4
Merge pull request natcap#1136 from emlys/task/update-sample-data-hash
c594198 
Update sample data and user guide hashes
@emlys
Committing the 3.12.1 release.
75f4434
@phargogh
Merge pull request natcap#1137 from natcap/autorelease/3.12.1
8d2b741 
Release 3.12.1 and merge into main
@emlys
use oldest-supported-numpy meta package in pyproject.toml
c4ce403
@phargogh
Merge pull request natcap#1140 from emlys/task/oldest-supported-numpy
353ff5d 
use oldest-supported-numpy meta package in pyproject.toml
@emlys
Merge branch 'main' of https://github.com/natcap/invest into road-net…
e3cfb84 
…work-distance
@emlys
fix una model pyname
c71c0d1
@emlys
set up UNA routing to make parallel requests
088ec82
@emlys
add docker-compose and nginx conf to scale and load balance valhalla …
2ac6a87 
…server
@emlys
cast values to float before writing to field
40b3a9a
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4 participants
@emlys @davemfish @dcdenu4 @phargogh