Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fixing misused labels #179

Merged
merged 3 commits into from
Feb 3, 2025
Merged

Fixing misused labels #179

merged 3 commits into from
Feb 3, 2025

Conversation

harmonbhasin
Copy link
Collaborator

Nextflow doesn't check if labels exist, which allows people to misspell labels. In that situation, nextflow will use whatever is available on the machine. This allowed some tests to pass using nf-test, but not using AWS Batch, since someone using nf-test probably has some pre-installed packages on their local machine. Additionally, two processes were mislabeled.

… two python scripts that were using 'core_utils' when they were supposed to use a python container. I added a python container as well.
@harmonbhasin
Copy link
Collaborator Author

Tests will fail until master is merged into dev.

@willbradshaw willbradshaw merged commit fce94af into dev Feb 3, 2025
4 checks passed
@willbradshaw willbradshaw deleted the harmon_fix_dev branch February 3, 2025 16:17
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants