Code

Apply Spectrum ART adjustments#462

Code

Merged

r-ash merged 21 commits intomastermrc-ide/naomi:masterfrom Apply-spectrum-ART-adjustmentsmrc-ide/naomi:Apply-spectrum-ART-adjustmentsCopy head branch name to clipboardDec 11, 2024

+419-182

Commits

Commits on Dec 10, 2024

• initial commit

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  49a2812

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• bump version

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Commits on Dec 11, 2024

• Merge branch 'master' into Apply-spectrum-ART-adjustments

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  f268245

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• update function to report adjusted attending and residing ART numbers from Spectrum

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  b1eb11a

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• Merge branch 'Apply-spectrum-ART-adjustments' of https://github.com/mrc-ide/naomi into Apply-spectrum-ART-adjustments

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  756e6bc

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• update tests

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• remove naomi-spectrum comparison check from navigator code

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• update comparison table output structure and warnings

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• Assign adjusted ART value from Spectrum to "art_dec31" used in model fit

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• update warnings

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• Remove difference, calculate this in the front end

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• Add back deleted pipe

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• fix anc programme warning

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• remove remaining navigator code

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  b0e60e4

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• fix navigator tests

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  5c7ec60

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• fix failing tests

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• fix failing spectrum test

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• update (more) failing tests

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• update roxygen docs

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• fix (one more) failing test

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• Remove failing navigator checklist test

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