Merge pull request #107 from morinlab/kdreval-dev

migrate functions and keep data

DESCRIPTION

@@ -32,8 +32,6 @@ LazyData: true
 Imports:
     dplyr,
     ggplot2,
-    purrr,
-    tibble,
     tidyr
 LazyDataCompression: xz
 Suggests: 

NAMESPACE

@@ -1,47 +1,8 @@
 # Generated by roxygen2: do not edit by hand
 
-S3method(arrange,genomic_data)
-S3method(filter,genomic_data)
-S3method(group_by,genomic_data)
-S3method(mutate,genomic_data)
-S3method(print,bed_data)
-S3method(print,maf_data)
-S3method(rename,genomic_data)
-S3method(select,genomic_data)
-S3method(ungroup,genomic_data)
-export(annotate_hotspots)
-export(assign_cn_to_ssm)
-export(bind_genomic_data)
-export(calc_mutation_frequency_bin_region)
-export(calc_mutation_frequency_bin_regions)
-export(check_excess_params)
-export(collate_results)
-export(cool_overlaps)
-export(create_bed_data)
-export(create_maf_data)
-export(create_seg_data)
-export(get_ashm_count_matrix)
-export(get_cn_segments)
-export(get_coding_ssm)
-export(get_coding_ssm_status)
 export(get_colours)
-export(get_gambl_metadata)
 export(get_genes)
-export(get_genome_build)
-export(get_manta_sv)
 export(get_mapped_colours)
-export(get_sample_cn_segments)
-export(get_ssm_by_patients)
-export(get_ssm_by_regions)
-export(get_ssm_by_samples)
-export(id_ease)
-export(preserve_genomic_attributes)
-export(process_regions)
-export(region_to_chunks)
-export(review_hotspots)
-export(strip_genomic_classes)
 import(dplyr)
 import(ggplot2)
-import(purrr)
-import(tibble)
 import(tidyr)