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Merge pull request #61 from kdelange/main
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eb file for new NGS_Demultiplexing
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pneerincx authored Dec 12, 2023
2 parents 2e9faf1 + d3c3f38 commit ca2f07c
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33 changes: 33 additions & 0 deletions n/NGS_Demultiplexing/NGS_Demultiplexing-2.5.4.eb
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name = 'NGS_Demultiplexing'
version = '2.5.4'
namelower = name.lower()

homepage = 'https://github.com/molgenis/NGS_Demultiplexing'
description = """Next Generation Sequencing data processing using the inhouse pipeline for Bcl To FastQ conversion, demultiplexing and standardized filename convertion."""

toolchain = SYSTEM
easyblock = 'Tarball'

#dependencies
dependencies = [
('Molgenis-Compute','20.03.1', '-Java-11-LTS'),
('PerlPlus', '5.34.1', '-v22.11.1',('GCCcore','11.3.0')),
('interop', '1.2.0', '', ('foss', '2022a')),
('bcl2fastq2', '2.20.0', '', ('GCC', '11.3.0')),
]

#
# Example URL: https://github.com/molgenis/NGS_Demultiplexing/archive/2.6.1.tar.gz
#
#
source_urls = [('http://github.com/molgenis/%s/archive/' % (name))]
sources = [('%s.tar.gz' % (version))]

checksums = ['4f4e11782fc34ef6349c12100a9908455f303ae2990fbc5c5d8c9143aeefe682']

sanity_check_paths = {
'files': ['workflow.csv', 'parameters.csv'],
'dirs': []
}

moduleclass = 'bio'

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