chore: add type test

apps/central/src/components/SchemaCreateModal.vue

@@ -159,6 +159,7 @@ export default {
         "PROJECTMANAGER",
         "GDI",
         "DATA_CATALOGUE_AGGREGATES",
+        "TYPE_TEST",
       ],
       includeDemoData: false,
     };

backend/molgenis-emx2-datamodels/src/main/java/org/molgenis/emx2/datamodels/DataModels.java

@@ -26,7 +26,8 @@ public enum Profile {
     GDI("_profiles/GDI.yaml"),
     SHARED_STAGING("_profiles/SharedStaging.yaml"),
     IMAGE_TEST("_profiles/ImageTest.yaml"),
-    PET_STORE("_profiles/PetStore.yaml");
+    PET_STORE("_profiles/PetStore.yaml"),
+    TYPE_TEST("_profiles/TypeTest.yaml");
 
     public static boolean hasProfile(String nameOther) {
       return Arrays.stream(values()).anyMatch(profile -> profile.name().equals(nameOther));

backend/molgenis-emx2-webapi/src/main/java/org/molgenis/emx2/RunMolgenisEmx2.java

@@ -26,6 +26,9 @@ public class RunMolgenisEmx2 {
   public static final boolean EXCLUDE_PETSTORE_DEMO =
       (Boolean)
           EnvironmentProperty.getParameter(Constants.MOLGENIS_EXCLUDE_PETSTORE_DEMO, false, BOOL);
+  public static final boolean INCLUDE_TYPE_TEST_DEMO =
+      (Boolean)
+          EnvironmentProperty.getParameter(Constants.MOLGENIS_INCLUDE_TYPE_TEST_DEMO, false, BOOL);
 
   public static void main(String[] args) {
     logger.info("Starting MOLGENIS EMX2 Software Version=" + Version.getVersion());
@@ -62,6 +65,11 @@ public static void main(String[] args) {
             DataModels.Profile.PET_STORE.getImportTask(schema, true).run();
           }
 
+          if (INCLUDE_TYPE_TEST_DEMO && db.getSchema("type test") == null) {
+            Schema schema = db.createSchema("type test");
+            DataModels.Profile.TYPE_TEST.getImportTask(schema, true).run();
+          }
+
           if (INCLUDE_CATALOGUE_DEMO && db.getSchema(CATALOGUE_DEMO) == null) {
             Schema schema = db.createSchema(CATALOGUE_DEMO, "from DataCatalogue demo data loader");
             DataModels.Profile.DATA_CATALOGUE.getImportTask(schema, true).run();

backend/molgenis-emx2/src/main/java/org/molgenis/emx2/Constants.java

@@ -62,6 +62,7 @@ public class Constants {
   public static final String MOLGENIS_INCLUDE_CATALOGUE_DEMO = "MOLGENIS_INCLUDE_CATALOGUE_DEMO";
   public static final String MOLGENIS_INCLUDE_DIRECTORY_DEMO = "MOLGENIS_INCLUDE_DIRECTORY_DEMO";
   public static final String MOLGENIS_EXCLUDE_PETSTORE_DEMO = "MOLGENIS_EXCLUDE_PETSTORE_DEMO";
+  public static final String MOLGENIS_INCLUDE_TYPE_TEST_DEMO = "MOLGENIS_INCLUDE_TYPE_TEST_DEMO";
 
   public static final String MOLGENIS_JWT_SHARED_SECRET = "MOLGENIS_JWT_SHARED_SECRET";
 

ci/create_or_update_k8s-azure.sh

@@ -36,11 +36,11 @@ helm upgrade --install ${NAME} ./helm-chart --namespace ${NAME} \
 --set image.tag=${TAG_NAME} \
 --set image.repository=${REPO} \
 --set image.pullPolicy=Always \
---set catalogue.includeCatalogueDemo=true \
 --set ssrCatalogue.image.tag=$TAG_NAME \
 --set ssrCatalogue.image.repository=$REPO2 \
 --set ssrCatalogue.environment.siteTitle="Preview Catalogue" \
 --set ssrCatalogue.environment.apiBase=https://${NAME}.dev.molgenis.org/ \
+--set includeTypeTestDemo=true \
 --set catalogue.includeCatalogueDemo=true \
 --set directory.includeDirectoryDemo=true \
 --set oidc.enabled=true \

data/_models/specific/typetest.csv

@@ -0,0 +1,43 @@
+tableName,tableExtends,tableType,columnName,columnType,key,required,refSchema,refTable,refLink,refBack,refLabel,defaultValue,validation,visible,computed,semantics,profiles,label,description
+Types,,,,,,,,,,,,,,,,,TypeTest,,A table containing a column for each column type
+Types,,,String types,heading,,,,,,,,,,,,,TypeTest,,
+Types,,,string type,string,1,,,,,,,,,,,,TypeTest,,
+Types,,,string array type,string_array,,,,,,,,,,,,,TypeTest,,
+Types,,,text type,text,,,,,,,,,,,,,TypeTest,,
+Types,,,text array type,text_array,,,,,,,,,,,,,TypeTest,,
+Types,,,json type,json,,,,,,,,,,,,,TypeTest,,
+Types,,,Simple types,heading,,,,,,,,,,,,,TypeTest,,
+Types,,,bool type,bool,,,,,,,,,,,,,TypeTest,,
+Types,,,bool array type,bool_array,,,,,,,,,,,,,TypeTest,,
+Types,,,uuid type,uuid,,,,,,,,,,,,,TypeTest,,
+Types,,,uuid array type,uuid_array,,,,,,,,,,,,,TypeTest,,
+Types,,,file type,file,,,,,,,,,,,,,TypeTest,,
+Types,,,Numeric types,heading,,,,,,,,,,,,,TypeTest,,
+Types,,,int type,int,,,,,,,,,,,,,TypeTest,,
+Types,,,int array type,int_array,,,,,,,,,,,,,TypeTest,,
+Types,,,long type,long,,,,,,,,,,,,,TypeTest,,
+Types,,,long array type,long_array,,,,,,,,,,,,,TypeTest,,
+Types,,,decimal type,decimal,,,,,,,,,,,,,TypeTest,,
+Types,,,decimal array type,decimal_array,,,,,,,,,,,,,TypeTest,,
+Types,,,Date types,heading,,,,,,,,,,,,,TypeTest,,
+Types,,,date type,date,,,,,,,,,,,,,TypeTest,,
+Types,,,date array type,date_array,,,,,,,,,,,,,TypeTest,,
+Types,,,datetime type,datetime,,,,,,,,,,,,,TypeTest,,
+Types,,,datetime array type,datetime_array,,,,,,,,,,,,,TypeTest,,
+Types,,,period type,period,,,,,,,,,,,,,TypeTest,,
+Types,,,period array type,period_array,,,,,,,,,,,,,TypeTest,
+Types,,,Relationship types,heading,,,,,,,,,,,,,TypeTest,,
+Types,,,ref type,ref,,,,Options,,,,,,,,,TypeTest,,
+Types,,,ref array type,ref_array,,,,Options,,,,,,,,,TypeTest,,
+Types,,,ref back type,ref,,,,Options,,,,,,,,,TypeTest,,
+Types,,,Extended types,heading,,,,,,,,,,,,,TypeTest,,
+Types,,,auto id type,auto_id,1,,,,,,,,,,,,TypeTest,,
+Types,,,ontology type,ontology,,,,Ontology,,,,,,,,,TypeTest,,
+Types,,,ontology array type,ontology_array,,,,Ontology,,,,,,,,,TypeTest,,
+Types,,,email type,email,,,,,,,,,,,,,TypeTest,,
+Types,,,email array type,email_array,,,,,,,,,,,,,TypeTest,,
+Types,,,hyperlink type,hyperlink,,,,,,,,,,,,,TypeTest,,
+Types,,,hyperlink array type,hyperlink_array,,,,,,,,,,,,,TypeTest,,
+Options,,,,,,,,,,,,,,,,,TypeTest,,A table options to test the ref column
+Options,,,option key,string,1,,,,,,,,,,,,TypeTest,,
+Options,,,option value,string,,,,,,,,,,,,,TypeTest,,

data/_profiles/TypeTest.yaml

@@ -0,0 +1,8 @@
+---
+name: Type Test
+description: "a schema for testing the available column types"
+
+profileTags: TypeTest
+
+# special options
+setViewPermission: anonymous

helm-chart/templates/deployment.yaml

@@ -45,6 +45,8 @@ spec:
                   key: databasepassword
             - name: MOLGENIS_POSTGRES_URI
               value: jdbc:postgresql://localhost/{{ .Values.database.name }}
+            - name: MOLGENIS_INCLUDE_TYPE_TEST_DEMO
+              value: {{ .Values.includeTypeTestDemo | quote }}
             - name: MOLGENIS_INCLUDE_CATALOGUE_DEMO
               value: {{ .Values.catalogue.includeCatalogueDemo | quote }}
             - name: MOLGENIS_INCLUDE_DIRECTORY_DEMO

helm-chart/values.yaml

@@ -40,6 +40,8 @@ postgres:
   password: postgres
   database: postgres
 
+includeTypeTestDemo: false
+
 catalogue:
   includeCatalogueDemo: false