Merge pull request #259 from moka-guys/transcript_checker

Bed file transcript checking script

Merge pull request #111 from woook/master

v1.2 into production

Merge pull request #85 from woook/master

correct NGSEQ3 bed files and put in code to (try a) stop happening again

new version of bed file generation script OOBed7_uses_mirrored_databa…

…se_.py. Main change is that new script will perform extra merge step after flanking regions have been added. This ensures that exon boundaries that are in close proximity are properly merged rather than being repeated within the bed file. Also bed script generates output for git version into log file

Copied Livebedfiles folder over from v1.0 of mokapipe