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Merge pull request #4 from moka-guys/cnv_format_update
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Change to replace entrezID with gene/accession in CNV bedfiles (#4)
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rebeccahaines1 authored Feb 20, 2025
2 parents 7a41b56 + 347ac2f commit 22c113c
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion app/bed_generator/bed_generator.py
Original file line number Diff line number Diff line change
Expand Up @@ -43,7 +43,7 @@ class BedGenerator:
},
'cnv': {
'fields': [
lambda r, _: str(r['entrez_id'])
lambda r, _: f"{r['gene']};{r['accession']}"
]
}
}
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