#1443 remove Instrument and InstrumetnValue comments

microbiomedata · Nov 29, 2023 · 3b38be9 · 3b38be9
1 parent d159329
commit 3b38be9
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diff --git a/src/schema/core.yaml b/src/schema/core.yaml
@@ -212,14 +212,6 @@ classes:
       type:
         description: An optional string that specified the type of object.
 
-  #  InstrumentValue:
-  #    is_a: AttributeValue
-  #    slots:
-  #      - has_unit
-  #      - has_numeric_value
-  #      - instrument_name
-
-
   QuantityValue:
     is_a: AttributeValue
     description: A simple quantity, e.g. 2cm
@@ -301,21 +293,6 @@ classes:
       - total_bases
       - type
 
-  #  Instrument:
-  #    is_a: NamedThing
-  #    aliases:
-  #      - device
-  #    description: >-
-  #      A material entity that is designed to perform a function in a scientific investigation, but is not a reagent[OBI].
-  #    exact_mappings:
-  #      - OBI:0000485
-  #    slot_usage:
-  #      id:
-  #        required: true
-  #        structured_pattern:
-  #          syntax: "{id_nmdc_prefix}:inst-{id_shoulder}-{id_blade}{id_version}{id_locus}"
-  #          interpolated: true
-
   MetaboliteQuantification:
     description: This is used to link a metabolomics analysis workflow to a specific metabolite
     slots:

diff --git a/src/schema/prov.yaml b/src/schema/prov.yaml
@@ -73,7 +73,5 @@ slots:
 
   used:
     domain: Activity
-    # some Instrument slot usages, but those require a CURIE, not a bare string
-    # this is being used more like instrument_name
     mappings:
       - prov:used
diff --git a/src/schema/workflow_execution_activity.yaml b/src/schema/workflow_execution_activity.yaml
@@ -292,7 +292,6 @@ classes:
       - has_peptide_quantifications
     slot_usage:
       used:
-        # range: Instrument
         description: The instrument used to collect the data used in the analysis
       id:
         required: true
@@ -309,7 +308,6 @@ classes:
     slot_usage:
       used:
         range: string
-        #        range: Instrument
         description: The instrument used to collect the data used in the analysis
       id:
         required: true