[Draft] Run with DINO data

[ma595]

This PR generalises the pipeline to work with DINO data.

• Resamples DINO monthly ssh output to annual.
• Adds a description of the pipeline in the README.md for generating a ML projected restart file (compatible with DINO).
• Amends hardcoded path in main_restart.py
• Modifies lib/restart.py to ensure compatibility with ML generated DINO files.
• Simple restart toolbox script Create simple script for restart toolbox #33
• Modify main_forecast.py so that it's compatible with DINO data and add docstring / improve structure.
• Make forecast deterministic given some random seed.

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[ma595]

Hi @isaacaka, a few comments:
Can you please rebase on top of changes to main.
Also, the image you provide in step 9 indicates 100 years. Have you managed to get to this point yet?

I've made a few changes in PR#31.

Let me know if you have any questions about fixing the conflicts.

[ma595]

For reference, my env.sh looks like this:

#! /bin/bash
# path to simus_predicted
# path to REBUILD_NEMO tools.
# path to DINO/NEMO simulation output

# CSD3 specific modules
module purge
module load rhel8/default-ccl
module load python/3.11.9/gcc/nptrdpll
module load netcdf-fortran/4.6.1/intel/intel-oneapi-mpi/kqukipdf
module load boost/1.85.0/gcc/zouxm6hy
export PYTHONENV=./venv3.9/bin/activate

source $PYTHONENV
# NEMO + XIOS
NEMO=/rds/project/rds-5mCMIDBOkPU/ma595/nemo/NEMO/
NEMO_PATH=$NEMO/nemo_4.2.1
XIOS=$NEMO/trunk
export CPATH=$NEMO/trunk/inc:$CPATH
export LD_LIBRARY_PATH=$XIOS/lib:$LD_LIBRARY_PATH
export REBUILD_NEMO=${NEMO_PATH}/tools/REBUILD_NEMO/rebuild_nemo


# output
output=$NEMO_PATH/tests/DINO
# point to ml output
ml_prediction_dir=$output/concatenate_grid_150/simus_predicted
# point to nemo output, checkpoint
nemo_output_dir=/rds/project/rds-5mCMIDBOkPU/ma595/nemo/NEMO/nemo_4.2.1/tests/DINO/EXP00-150years-restart-identity/