BugFix (another)on how PSMs are filtered to unique PSMs

Extended the summary output
lutzfischer · Apr 30, 2015 · 275a983 · 275a983
1 parent 7cd000a
commit 275a983
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/main/java/org/rappsilber/fdr/OfflineFDR.java b/src/main/java/org/rappsilber/fdr/OfflineFDR.java
@@ -552,7 +552,7 @@ public void calculatePSMFDR(double fdr, double safetyFactor, boolean ignoreGroup
                 if (stored != null) {
                     if (stored.getScore()< psm.getScore())
                         uniquePSM.put(key, psm);
-                } else {
+                } else if (!isPsm_directional()) {
                     key = psm.getPeptide2().getSequence() + "_!xl!_" 
                                             + psm.getPeptide1().getSequence() + "_!xl!_" 
                                             + psm.getPeptideLinkSite2() + "_!xl!_"