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NeuroShepherd committed Sep 6, 2024
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2 changes: 1 addition & 1 deletion .nojekyll
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184 changes: 105 additions & 79 deletions about.html
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115 changes: 72 additions & 43 deletions add_readme.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
<meta name="generator" content="quarto-1.6.9">
<meta name="generator" content="quarto-1.4.551">

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">


<title>Add a README – Code publishing tutorial</title>
<title>Code publishing tutorial - Add a README</title>
<style>
code{white-space: pre-wrap;}
span.smallcaps{font-variant: small-caps;}
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}
@media print {
pre > code.sourceCode { white-space: pre-wrap; }
pre > code.sourceCode > span { display: inline-block; text-indent: -5em; padding-left: 5em; }
pre > code.sourceCode > span { text-indent: -5em; padding-left: 5em; }
}
pre.numberSource code
{ counter-reset: source-line 0; }
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<meta name="quarto:offset" content="./">
<link href="./archive.html" rel="next">
<link href="./choose_license.html" rel="prev">
<link href="./images/LMU-OSC_favicon.jpg" rel="icon" type="image/jpeg">
<script src="site_libs/quarto-html/quarto.js"></script>
<script src="site_libs/quarto-html/popper.min.js"></script>
<script src="site_libs/quarto-html/tippy.umd.min.js"></script>
<script src="site_libs/quarto-html/anchor.min.js"></script>
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<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
<script src="site_libs/bootstrap/bootstrap.min.js"></script>
<link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
<link href="site_libs/bootstrap/bootstrap-53f13b786142b8a570eca1b085745c31.min.css" rel="stylesheet" append-hash="true" id="quarto-bootstrap" data-mode="light">
<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
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"panel-placement": "start",
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"search-matching-documents-text": "matching documents",
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}
}</script>

<script src="https://cdnjs.cloudflare.com/polyfill/v3/polyfill.min.js?features=es6"></script>
<script src="https://polyfill.io/v3/polyfill.min.js?features=es6"></script>
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<script type="text/javascript">
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<span class="navbar-title">Code publishing tutorial</span>
</a>
</div>
<div id="quarto-search" class="" title="Search"></div>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarCollapse" aria-controls="navbarCollapse" aria-expanded="false" aria-label="Toggle navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
<span class="navbar-toggler-icon"></span>
</button>
<div class="collapse navbar-collapse" id="navbarCollapse">
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<a class="nav-link" href="./index.html">
<span class="menu-text">Home</span></a>
</li>
</ul>
<ul class="navbar-nav navbar-nav-scroll ms-auto">
<li class="nav-item">
<a class="nav-link" href="./about.html">
<span class="menu-text">About</span></a>
</li>
</ul>
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<div class="quarto-navbar-tools">
<div class="quarto-navbar-tools">
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<ul class="dropdown-menu" aria-labelledby="quarto-navigation-tool-dropdown-0">
<li>
<a class="dropdown-item quarto-navbar-tools-item" href="https://github.com/lmu-osc/code-publishing">
Source Code
</a>
</li>
<li>
<a class="dropdown-item quarto-navbar-tools-item" href="https://github.com/lmu-osc/code-publishing/issues">
Report a Bug
</a>
</li>
</ul>
</div>
<a href="https://www.osc.uni-muenchen.de/index.html" title="" class="quarto-navigation-tool px-1" aria-label=""><i class="bi bi-house-heart"></i></a>
</div>
</div> <!-- /container-fluid -->
</nav>
<nav class="quarto-secondary-nav">
<div class="container-fluid d-flex">
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<button type="button" class="quarto-btn-toggle btn" data-bs-toggle="collapse" data-bs-target=".quarto-sidebar-collapse-item" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
<i class="bi bi-layout-text-sidebar-reverse"></i>
</button>
<nav class="quarto-page-breadcrumbs" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="./add_readme.html">Add a README</a></li></ol></nav>
<a class="flex-grow-1" role="navigation" data-bs-toggle="collapse" data-bs-target=".quarto-sidebar-collapse-item" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
<a class="flex-grow-1" role="button" data-bs-toggle="collapse" data-bs-target=".quarto-sidebar-collapse-item" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
</a>
<button type="button" class="btn quarto-search-button" aria-label="" onclick="window.quartoOpenSearch();">
<i class="bi bi-search"></i>
</button>
</div>
</nav>
</header>
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<div id="quarto-content" class="quarto-container page-columns page-rows-contents page-layout-article page-navbar">
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<nav id="quarto-sidebar" class="sidebar collapse collapse-horizontal quarto-sidebar-collapse-item sidebar-navigation floating overflow-auto">
<div class="mt-2 flex-shrink-0 align-items-center">
<div class="sidebar-search">
<div id="quarto-search" class="" title="Search"></div>
</div>
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<ul class="list-unstyled mt-1">
<li class="sidebar-item">
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</nav>
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<div id="quarto-margin-sidebar" class="sidebar margin-sidebar"><div class="quarto-margin-header"><div class="margin-header-item">
<p><img src="./images/LMU-OSC_logo.jpg" class="img-fluid" width="175"></p>
</div></div>
<nav id="TOC" role="doc-toc" class="toc-active">
<h2 id="toc-title">On this page</h2>

<ul>
<li><a href="#creating-a-readme" id="toc-creating-a-readme" class="nav-link active" data-scroll-target="#creating-a-readme">Creating a README</a></li>
</ul>
</nav>
<div class="toc-actions"><ul><li><a href="https://github.com/lmu-osc/introduction-to-renv/edit/main/add_readme.qmd" class="toc-action"><i class="bi bi-github"></i>Edit this page</a></li><li><a href="https://github.com/lmu-osc/introduction-to-renv/issues/new" class="toc-action"><i class="bi empty"></i>Report an issue</a></li></ul></div></nav>
</div>
<!-- main -->
<main class="content" id="quarto-document-content">
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</section>


<div id="quarto-appendix" class="default"><section id="footnotes" class="footnotes footnotes-end-of-document" role="doc-endnotes"><h2 class="anchored quarto-appendix-heading">Footnotes</h2>
<a onclick="window.scrollTo(0, 0); return false;" role="button" id="quarto-back-to-top"><i class="bi bi-arrow-up"></i> Back to top</a><div id="quarto-appendix" class="default"><section id="footnotes" class="footnotes footnotes-end-of-document" role="doc-endnotes"><h2 class="anchored quarto-appendix-heading">Footnotes</h2>

<ol>
<li id="fn1"><p>Luckily, the extensions are included in the project folder, so technically their version is already recorded in the project’s files.<a href="#fnref1" class="footnote-back" role="doc-backlink">↩︎</a></p></li>
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}
return false;
}
const onCopySuccess = function(e) {
const clipboard = new window.ClipboardJS('.code-copy-button', {
text: function(trigger) {
const codeEl = trigger.previousElementSibling.cloneNode(true);
for (const childEl of codeEl.children) {
if (isCodeAnnotation(childEl)) {
childEl.remove();
}
}
return codeEl.innerText;
}
});
clipboard.on('success', function(e) {
// button target
const button = e.trigger;
// don't keep focus
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}, 1000);
// clear code selection
e.clearSelection();
}
const getTextToCopy = function(trigger) {
const codeEl = trigger.previousElementSibling.cloneNode(true);
for (const childEl of codeEl.children) {
if (isCodeAnnotation(childEl)) {
childEl.remove();
}
}
return codeEl.innerText;
}
const clipboard = new window.ClipboardJS('.code-copy-button:not([data-in-quarto-modal])', {
text: getTextToCopy
});
clipboard.on('success', onCopySuccess);
if (window.document.getElementById('quarto-embedded-source-code-modal')) {
// For code content inside modals, clipBoardJS needs to be initialized with a container option
// TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
text: getTextToCopy,
container: window.document.getElementById('quarto-embedded-source-code-modal')
});
clipboardModal.on('success', onCopySuccess);
}
var localhostRegex = new RegExp(/^(?:http|https):\/\/localhost\:?[0-9]*\//);
var mailtoRegex = new RegExp(/^mailto:/);
var filterRegex = new RegExp('/' + window.location.host + '/');
var filterRegex = new RegExp("https:\/\/lmu-osc\.github\.io\/code-publishing\/");
var isInternal = (href) => {
return filterRegex.test(href) || localhostRegex.test(href) || mailtoRegex.test(href);
}
// Inspect non-navigation links and adorn them if external
var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item):not(.quarto-navigation-tool):not(.about-link)');
var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item):not(.quarto-navigation-tool)');
for (var i=0; i<links.length; i++) {
const link = links[i];
if (!isInternal(link.href)) {
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</div>
</nav>
</div> <!-- /content -->
<footer class="footer">
<div class="nav-footer">
<div class="nav-footer-left">
&nbsp;
</div>
<div class="nav-footer-center">
<p>Copyright, 2024 Open Science Center at LMU Munich</p>
<div class="toc-actions d-sm-block d-md-none"><ul><li><a href="https://github.com/lmu-osc/introduction-to-renv/edit/main/add_readme.qmd" class="toc-action"><i class="bi bi-github"></i>Edit this page</a></li><li><a href="https://github.com/lmu-osc/introduction-to-renv/issues/new" class="toc-action"><i class="bi empty"></i>Report an issue</a></li></ul></div></div>
<div class="nav-footer-right">
&nbsp;
</div>
</div>
</footer>



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