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Ropebwt3-3.2 (r137)
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@lh3 lh3 released this 24 Jul 01:02
· 124 commits to master since this release
v3.2
725c659

This release implemented several critical features for sequence search:

  • New feature: Travis Gagie's algorithm for finding long MEMs. It is faster
    and now the default algorithm for MEM finding.

  • New feature: BWA-SW for local alignment. This algorithm allows mismatches
    and short gaps.

  • New feature: sampled suffix array for obtaining mapping positions.

  • Breaking: renamed match to mem.

(3.2: 23 July 2024, r137)

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