correct minor bug

julienfumey · Dec 28, 2022 · be7d688 · be7d688
1 parent 0b8ff4d
commit be7d688
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/analyse_wg_ncbi.nf b/analyse_wg_ncbi.nf
@@ -186,7 +186,7 @@ process checkforAltScaffold{
     """
     if grep -q alt-scaffold $report
         then 
-            echo ${spName} > modified_genome.txt
+            echo "${spName}" > modified_genome.txt
             listGoodScaffold.sh ${report} > good_scaffold_list.txt
             listRemovedGenomeParts.sh ${report} > ${report.baseName}_info_removed_genome_parts.txt
         else