Merge pull request #67 from geodynamics/baagaard/fix-make-dist

Update Makefiles for distribution
geodynamics · Jun 6, 2022 · ca4b7e8 · ca4b7e8
2 parents a8cbfad + 5ab6e9d
commit ca4b7e8
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Showing 224 changed files with 550 additions and 494 deletions.
diff --git a/Makefile.am b/Makefile.am
@@ -7,9 +7,9 @@
 # This code was developed as part of the Computational Infrastructure
 # for Geodynamics (http://geodynamics.org).
 #
-# Copyright (c) 2010-2017 University of California, Davis
+# Copyright (c) 2010-2022 University of California, Davis
 #
-# See COPYING for license information.
+# See LICENSE.md for license information.
 #
 # ----------------------------------------------------------------------
 #
@@ -20,7 +20,8 @@ SUBDIRS = \
 	libsrc \
 	modulesrc \
 	spatialdata \
-	templates
+	templates \
+	docs
 
 
 if ENABLE_TESTING
@@ -33,7 +34,12 @@ DISTCHECK_CONFIGURE_FLAGS = \
 	LDFLAGS="-L${PROJ4_LIBDIR} -L${CPPUNIT_LIBDIR} -L${CIG_LIBDIR}"
 
 EXTRA_DIST = \
-	CHANGES.md \
+    README.md \
+    CHANGES.md \
+    setup.py \
+    setup.cfg \
+    configure.ac \
+	applications/gensimpledb.py \
     LICENSE.md \
 	docker/spatialdata-testenv \
 	ci-config/run_tests.sh \

diff --git a/applications/gensimpledb.py b/applications/gensimpledb.py
@@ -7,9 +7,9 @@
 # This code was developed as part of the Computational Infrastructure
 # for Geodynamics (http://geodynamics.org).
 #
-# Copyright (c) 2010-2017 University of California, Davis
+# Copyright (c) 2010-2022 University of California, Davis
 #
-# See COPYING for license information.
+# See LICENSE.md for license information.
 #
 # ======================================================================
 #

diff --git a/check.am b/check.am
@@ -7,9 +7,9 @@
 # This code was developed as part of the Computational Infrastructure
 # for Geodynamics (http://geodynamics.org).
 #
-# Copyright (c) 2010-2017 University of California, Davis
+# Copyright (c) 2010-2022 University of California, Davis
 #
-# See COPYING for license information.
+# See LICENSE.md for license information.
 #
 # ----------------------------------------------------------------------
 #

diff --git a/configure.ac b/configure.ac
@@ -7,9 +7,9 @@ dnl
 dnl This code was developed as part of the Computational Infrastructure
 dnl for Geodynamics (http://geodynamics.org).
 dnl
-dnl Copyright (c) 2010-2017 University of California, Davis
+dnl Copyright (c) 2010-2022 University of California, Davis
 dnl
-dnl See COPYING for license information.
+dnl See LICENSE.md for license information.
 dnl
 dnl ----------------------------------------------------------------------
 dnl

diff --git a/docs/Makefile.am b/docs/Makefile.am
@@ -9,7 +9,7 @@
 # This code was developed as part of the Computational Infrastructure
 # for Geodynamics (http://geodynamics.org).
 #
-# Copyright (c) 2010-2021 University of California, Davis
+# Copyright (c) 2010-2022 University of California, Davis
 #
 # See LICENSE.md for license information.
 #
@@ -22,42 +22,64 @@ dist_noinst_DATA = \
 	_static/css/custom.css \
 	_static/images/cig_logo_dots.png \
 	_static/images/cig_short_nolabel.png \
-	_static/images/cig_short_pylith.png \
-	_templates/sidebase-cig.html \
-	palettes/figcolors.tex \
+	_static/images/cig_short_spatialdata.png \
+	_static/images/cig_short_spatialdata.xcf \
+	_templates/sidebar-cig.html \
 	index.md \
-	references.bib \
-	references.md \
 	intro/index.md \
+	intro/development-plan.md \
+	intro/preface.md \
 	intro/quickstart.md \
 	intro/release-notes.md \
-	intro/development-plan.md \
 	intro/images/easy.png \
 	intro/images/intermediate.png \
 	intro/images/difficult.png \
 	intro/images/expert.png \
 	user/index.md \
-	user/preface.md \
-	user/intro/index.md \
-	user/intro/figs/workflow.tex \
-	user/intro/figs/workflow.pdf \
-	user/intro/figs/workflow.jpg \
-	user/install/index.md \
-	user/install/figs/installchoices.tex \
-	user/install/figs/installchoices.pdf \
-	user/install/figs/installchoices.jpg \
-	user/examples/index.md \
-	user/examples/examples-other.md \
-	user/examples/paraview-python.md \
-	user/2d/box/index.md \
-	user/3d/box/index.md \
-	user/2d/strikeslip/index.md \
-	user/2d/reverse/index.md \
-	user/2d/reverse/meshing.md \
-	user/2d/reverse/figs/geometry.pdf \
-	user/2d/reverse/figs/geometry.png \
-	user/2d/subduction/index.md \
-	user/3d/subduction/index.md
+	user/file-formats/simple-grid.md \
+	user/file-formats/index.md \
+	user/file-formats/time-history.md \
+	user/file-formats/simple-ascii.md \
+	user/timedb/index.md \
+	user/components/update.sh \
+	user/components/index.md \
+	user/components/utils/PointsStream.md \
+	user/components/utils/UnitTestApp.md \
+	user/components/utils/index.md \
+	user/components/geocoords/CSGeo.md \
+	user/components/geocoords/index.md \
+	user/components/geocoords/CSCart.md \
+	user/components/geocoords/CoordSys.md \
+	user/components/units/NondimElasticQuasistatic.md \
+	user/components/units/index.md \
+	user/components/units/NondimElasticDynamic.md \
+	user/components/units/Nondimensional.md \
+	user/components/spatialdb/SimpleGridDB.md \
+	user/components/spatialdb/CompositeDB.md \
+	user/components/spatialdb/SimpleDB.md \
+	user/components/spatialdb/UserFunctionDB.md \
+	user/components/spatialdb/generator/Geometry.md \
+	user/components/spatialdb/generator/Value.md \
+	user/components/spatialdb/generator/GenSimpleDBApp.md \
+	user/components/spatialdb/generator/index.md \
+	user/components/spatialdb/generator/Shaper.md \
+	user/components/spatialdb/SimpleGridAscii.md \
+	user/components/spatialdb/GravityField.md \
+	user/components/spatialdb/index.md \
+	user/components/spatialdb/TimeHistory.md \
+	user/components/spatialdb/SpatialDBObj.md \
+	user/components/spatialdb/SCECCVMH.md \
+	user/components/spatialdb/UniformDB.md \
+	user/components/spatialdb/SimpleIOAscii.md \
+	user/nondimensionalization.md \
+	user/spatialdb/simplegriddb.md \
+	user/spatialdb/overview.md \
+	user/spatialdb/compositedb.md \
+	user/spatialdb/simpledb.md \
+	user/spatialdb/index.md \
+	user/spatialdb/gravity-field.md \
+	user/spatialdb/uniformdb.md \
+	user/coordsys.md	
 
 
 # End of file 
diff --git a/libsrc/Makefile.am b/libsrc/Makefile.am
@@ -7,9 +7,9 @@
 # This code was developed as part of the Computational Infrastructure
 # for Geodynamics (http://geodynamics.org).
 #
-# Copyright (c) 2010-2017 University of California, Davis
+# Copyright (c) 2010-2022 University of California, Davis
 #
-# See COPYING for license information.
+# See LICENSE.md for license information.
 #
 # ----------------------------------------------------------------------
 #

diff --git a/libsrc/spatialdata/Makefile.am b/libsrc/spatialdata/Makefile.am
@@ -7,9 +7,9 @@
 # This code was developed as part of the Computational Infrastructure
 # for Geodynamics (http://geodynamics.org).
 #
-# Copyright (c) 2010-2017 University of California, Davis
+# Copyright (c) 2010-2022 University of California, Davis
 #
-# See COPYING for license information.
+# See LICENSE.md for license information.
 #
 # ----------------------------------------------------------------------
 #

diff --git a/libsrc/spatialdata/geocoords/CSCart.cc b/libsrc/spatialdata/geocoords/CSCart.cc
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/CSCart.hh b/libsrc/spatialdata/geocoords/CSCart.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/CSGeo.cc b/libsrc/spatialdata/geocoords/CSGeo.cc
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/CSGeo.hh b/libsrc/spatialdata/geocoords/CSGeo.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/CSPicklerAscii.cc b/libsrc/spatialdata/geocoords/CSPicklerAscii.cc
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/CSPicklerAscii.hh b/libsrc/spatialdata/geocoords/CSPicklerAscii.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/Converter.cc b/libsrc/spatialdata/geocoords/Converter.cc
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/Converter.hh b/libsrc/spatialdata/geocoords/Converter.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/CoordSys.cc b/libsrc/spatialdata/geocoords/CoordSys.cc
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/CoordSys.hh b/libsrc/spatialdata/geocoords/CoordSys.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/geocoords/Makefile.am b/libsrc/spatialdata/geocoords/Makefile.am
@@ -7,9 +7,9 @@
 # This code was developed as part of the Computational Infrastructure
 # for Geodynamics (http://geodynamics.org).
 #
-# Copyright (c) 2010-2017 University of California, Davis
+# Copyright (c) 2010-2022 University of California, Davis
 #
-# See COPYING for license information.
+# See LICENSE.md for license information.
 #
 # ----------------------------------------------------------------------
 #

diff --git a/libsrc/spatialdata/geocoords/geocoordsfwd.hh b/libsrc/spatialdata/geocoords/geocoordsfwd.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/spatialdb/CompositeDB.cc b/libsrc/spatialdata/spatialdb/CompositeDB.cc
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/spatialdb/CompositeDB.hh b/libsrc/spatialdata/spatialdb/CompositeDB.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/spatialdb/Exception.hh b/libsrc/spatialdata/spatialdb/Exception.hh
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //

diff --git a/libsrc/spatialdata/spatialdb/Exception.icc b/libsrc/spatialdata/spatialdb/Exception.icc
@@ -7,9 +7,9 @@
 // This code was developed as part of the Computational Infrastructure
 // for Geodynamics (http://geodynamics.org).
 //
-// Copyright (c) 2010-2017 University of California, Davis
+// Copyright (c) 2010-2022 University of California, Davis
 //
-// See COPYING for license information.
+// See LICENSE.md for license information.
 //
 // ----------------------------------------------------------------------
 //