Changes made to fSCA-SNOTEL

.github/actions/buildresources/action.yaml

@@ -32,7 +32,11 @@ runs:
     - name: Build JupyterBook
       shell: bash -l {0}
       run: |
+<<<<<<< HEAD
         jupyter-book build book
+=======
+        jupyter-book build book --builder html
+>>>>>>> bb3679fabc9b231f0a51b8a982f59cb4d1adb432
 
     - name: Dump Build Logs
       if: always()

.github/workflows/deploy.yaml

@@ -20,7 +20,11 @@ jobs:
 
     - uses: ./.github/actions/buildresources
       with:
+<<<<<<< HEAD
         jb-cache: false
+=======
+        jb-cache: true
+>>>>>>> bb3679fabc9b231f0a51b8a982f59cb4d1adb432
         publish-to-gh: true
         jb-save: true
         token:  ${{ secrets.GITHUB_TOKEN }}

.github/workflows/qaqc.yaml

@@ -25,6 +25,7 @@ jobs:
       run: |
         python .github/workflows/ensure_clean_notebooks.py
 
+<<<<<<< HEAD
     # NOTE: this isn't a comprehensive spellcheck, just common typos
     - name: Spellcheck
       if: always()
@@ -34,6 +35,14 @@ jobs:
         check_hidden: true
         skip: '.git,qaqc.yml'
         ignore_words_list: slippy,hist
+=======
+    - name: Install pyspellchecker
+      run: |
+          pip install pyspellchecker
+
+    - name: Custom Spellcheck with Ignore List
+      run: python .github/workflows/spellcheck.py
+>>>>>>> bb3679fabc9b231f0a51b8a982f59cb4d1adb432
 
     # borrowed from https://github.com/ProjectPythia/pythia-foundations/blob/main/.github/workflows/link-checker.yaml
     - name: Disable Notebook Execution Before Linkcheck

.github/workflows/spellcheck.py

@@ -0,0 +1,62 @@
+from spellchecker import SpellChecker
+import nbformat
+import os
+import sys
+import string  # Import the string module to get a list of punctuation characters
+
+def remove_punctuation(text):
+  translator = str.maketrans('', '', string.punctuation)
+  return text.translate(translator)
+
+def spell_check_notebook(filepath, ignore_words):
+  spell = SpellChecker()
+  spell.word_frequency.load_words(ignore_words)
+
+  misspelled_words = {}
+
+  with open(filepath, 'r', encoding='utf-8') as f:
+    nb = nbformat.read(f, as_version=4)
+
+  for cell in nb.cells:
+    if cell.cell_type == 'markdown':
+      # Preprocess the cell text to remove punctuation before splitting into words
+      text = remove_punctuation(cell.source)
+      misspelled = spell.unknown(text.split())
+      if misspelled:
+        if filepath not in misspelled_words:
+          misspelled_words[filepath] = set()
+        misspelled_words[filepath].update(misspelled)
+
+  return misspelled_words
+
+def spell_check_directory(directory, ignore_words):
+  all_misspelled_words = {}
+  for subdir, dirs, files in os.walk(directory):
+    for file in files:
+      if file.endswith('.ipynb'):
+        filepath = os.path.join(subdir, file)
+        result = spell_check_notebook(filepath, ignore_words)
+        if result:
+          all_misspelled_words.update(result)
+
+  if all_misspelled_words:
+    for filepath, words in all_misspelled_words.items():
+      print(f"Misspelled words in {filepath}: {', '.join(words)}")
+    sys.exit(1)  # Exit with a non-zero status code to indicate failure
+
+if __name__ == "__main__":
+  ignore_list = [
+    "geoweaver", "workflow", "datasets", "snotel", "snowpack", "amsrderived", "highelevation",
+    "snowpacktelemetrynetwork", "snowcastwormhole", "500m", "amsr", "decisionmaking",
+    "qualitycontrolled", "pagehttpswwwearthdatanasagovsensorsamsre", "netcdf", "daac", "4km",
+    "satelliteii", "usthe", "strategizing", "xband", "modis", "pagehttpswwwearthdatanasagovsensorsmodis",
+    "nam", "amsrrelated", "adeosii", "mesoscale", "amsradeosii", "apis", "asos", "missionwater",
+    "metadata", "shortterm", "groundbased", "hdf", "british", "october", "level2a", "gcomw1", "csv",
+    "dataloggers", "columbia", "ascii", "tsv", "amsadeosii", "longterm", "onboard", "wrf", "km", "hdf5",
+    "nsidc", "realtime", "satellitebased", "amsre", "level1a", "websitehttpswwwclimatologylaborggridmethtml",
+    "124th", "cryospheric", "american", "timestamped", "geolocation", "nrcs", "satellitederived", "awdn",
+    "1000m", "snowmelt", "nasas", "amsr2", "dataset", "gridmet", "hightech", "youll", "cryosphere", "µm",
+    "250m", "highspatial", "hydroclimatic", "fsca", "workflow", "swe", "eg", "snowtel", "gportalhttpsgportaljaxajpgpr", 'scan', "gdp", "scansnowtel", "geo", "aoi", "climateengineorghttpclimateengineorg", "daily", "monitoring", "youre", "checkbox", "nasa", "toolhttpsclimatenorthwestknowledgenetmacagdpphp", "v6", "element", "thredds", "climate", "xy", "dropdown", "websitehttpwwwwccnrcsusdagovnwccinventory", "websitehttpsearthexplorerusgsgov", "havent", "wgethttpswwwclimatologylaborgwgetgridmethtml", "lpdaac", "mod09ga", "earthdata", "nasahttpsursearthdatanasagov", "shapefile", "statecounty", "gcomw", "dont", "snowtel", "opendap", "popup", "data", "wget", "categoryfuturewarning", "preprocess", "colormapped", "doesnt", "trainstartdate", "csvs", "png", "functionalities", "tuples", "warningsfilterwarningsignore", "urllib", "yearsit", "userdefined", "datetime", "dataframe", "preparecumulativehistorycsvs", "dataframes", "userspecified", "datan", "1st", "url", "netcdf4", "mai", "matplotlib", "dem", "futurewarnings", "nc", "forcetrue", "timesensitive", "trainenddate", "cumulative", "downloader",
+    "Daily", "scan", "climate repository", "https://www.northwestknowledgenet.metdata/data", "data", "Element", "SNOTELmonitoring", "cumulative", "Climate", "repository", "repositoryhttpswwwnorthwestknowledgenetmetdatadata", "servicehttpssuzakueorcjaxajpgcomwresearchresdisthtml", "snowtel, data", "Climate Monitoring",
+    "Adin"
+  ]

.gitignore

@@ -2,7 +2,11 @@
 
 # Jupyter Book things
 .bash_history
+<<<<<<< HEAD
 *_build
+=======
+#*_build
+>>>>>>> bb3679fabc9b231f0a51b8a982f59cb4d1adb432
 .jupyter-server-log.txt
 .config/
 .jupyter/
@@ -11,7 +15,11 @@
 
 # cookiecutter webpage things
 cookiecutter.json
+<<<<<<< HEAD
 /book/_build/html/assets
+=======
+#/book/_build/html/assets
+>>>>>>> bb3679fabc9b231f0a51b8a982f59cb4d1adb432
 
 # Byte-compiled / optimized / DLL files
 __pycache__/
@@ -141,4 +149,8 @@ venv.bak/
 dmypy.json
 
 # Pyre type checker
-.pyre/
+<<<<<<< HEAD
+.pyre/
+=======
+.pyre/
+>>>>>>> bb3679fabc9b231f0a51b8a982f59cb4d1adb432

binder/environment.yml

@@ -0,0 +1 @@
+../conda/environment.yml

binder/environment.yml~HEAD

@@ -0,0 +1 @@
+../conda/environment.yml

book/_build/.jupyter_cache/__version__.txt

@@ -0,0 +1 @@
+1.0.0

book/_build/.jupyter_cache/executed/2eb7556659b9f1a5867460a1053b787d/base.ipynb

@@ -0,0 +1,24 @@
+{
+ "cells": [],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.11.0"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}