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Always run all SV callers#542

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fellen31 wants to merge 11 commits intogenomic-medicine-sweden:devgenomic-medicine-sweden/nallo:devfrom fellen31:several-sv-callersfellen31/skierfe:several-sv-callersCopy head branch name to clipboard

+429-639

Commits

Commits on Jan 21, 2025

• Downgrade to Sniffles1

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  e9bc3d2

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• Update CHANGELOG.md

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  88e9ecc

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• bump deepvariant version (genomic-medicine-sweden#535)

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  40757c0

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• Always run multiple SV-callers

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• changelog

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• changelog

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Commits on Jan 22, 2025

• update tests and ci

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Commits on Jan 24, 2025

• Also output CNV-calls

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• CHANGELOG

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• Merge remote-tracking branch 'upstream/dev' into several-sv-callers

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• update conf

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