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Always run all SV callers #1690

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Always run all SV callers

Always run all SV callers #1690

Triggered via pull request January 24, 2025 13:45
@fellen31fellen31
synchronize #542
fellen31:several-sv-callers
Status Cancelled
Total duration 9m 45s
Artifacts –

ci.yml

on: pull_request
Matrix: test
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10 errors and 16 warnings
samplesheet | docker | NF-latest-stable
Process completed with exit code 1.
samplesheet_multisample_ont_bam | docker | NF-latest-stable
Process completed with exit code 1.
samplesheet_multisample_ont_bam | docker | NF-24.04.2
Canceling since a higher priority waiting request for 'nf-core CI-542' exists
samplesheet_multisample_ont_bam | docker | NF-24.04.2
The operation was canceled.
samplesheet | docker | NF-24.04.2
Canceling since a higher priority waiting request for 'nf-core CI-542' exists
samplesheet | docker | NF-24.04.2
The operation was canceled.
samplesheet_multisample_bam | docker | NF-24.04.2
Canceling since a higher priority waiting request for 'nf-core CI-542' exists
samplesheet_multisample_bam | docker | NF-24.04.2
The operation was canceled.
samplesheet_multisample_bam | docker | NF-latest-stable
Canceling since a higher priority waiting request for 'nf-core CI-542' exists
samplesheet_multisample_bam | docker | NF-latest-stable
The operation was canceled.
CALL_REPEAT_EXPANSIONS | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
RANK_VARIANTS | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ANNOTATE_SVS | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
CALL_REPEAT_EXPANSIONS | docker | NF-24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
SNV_ANNOTATION | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
METHYLATION | docker | NF-24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
RANK_VARIANTS | docker | NF-24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
METHYLATION | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
SHORT_VARIANT_CALLING | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
SNV_ANNOTATION | docker | NF-24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ANNOTATE_SVS | docker | NF-24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
SHORT_VARIANT_CALLING | docker | NF-24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
CALL_SVS | docker | NF-24.04.2
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
CALL_SVS | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
samplesheet | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
samplesheet_multisample_ont_bam | docker | NF-latest-stable
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636