4.4.2

Commits

• 8d2555b: fix upload to pypi (Richard Challis) #222
• 4bda6a0: add deprecation warning to blobtools host (Richard Challis) #240,#242
• 743ce0a: Bump version: 4.4.1 → 4.4.2 (Richard Challis) #240,#242

4.4.0

Commits

• 8c1875e: switch containers to miniforge conda (Richard Challis)
• 36b7483: fix conda install path (Richard Challis)
• 252bac8: fix miniforge install (Richard Challis)
• 8f2f5c5: move conda env copy (Richard Challis)
• 8311b80: relax python version constraint in containers (Richard Challis)
• 53e7ee0: update btk version in dependencies (Richard Challis)
• e7e90ba: relax blobtoolkit version constraint in deps container (Richard Challis)
• fd5ad95: modify versions (Richard Challis)
• 1fc88d2: update versions in docker env yaml (Richard Challis)
• 31fb53e: Bump version: 4.3.13 → 4.4.0 (Richard Challis)

4.3.13

Commits

• 6bfd3bf: update packaging and dependencies (Richard Challis)
• 599a718: make indexing non-blocking (Richard Challis)
• de7614b: remove experimental solver flag (Richard Challis)
• 73ad685: update versions (Richard Challis)
• a9818dd: change dependency versions (Richard Challis)
• 27b757f: roll back busco (Richard Challis)
• 01927b4: use python 3.12 (Richard Challis)
• daa3154: switch to python 3.10 as default version (Richard Challis)
• 9837e94: revert to python 3.9 in containers (Richard Challis)
• 60f4196: fix pipeline package python version (Richard Challis)
• 78a1327: Bump version: 4.3.12 → 4.3.13 (Richard Challis)
• 75931da: remove python 3.13 from build matrix (Richard Challis)
• 8958566: skip macos build (Richard Challis)

4.3.11

Commits

• a95c7bb: Bump version: 4.3.9 → 4.3.10 (Richard Challis)
• 1f47b1e: update pipeline version (Richard Challis)
• 007f00c: update readme version number (Richard Challis)
• af00f45: update readem version format (Richard Challis)
• 6bbc86e: Bump version: 4.3.10 → 4.3.11 (Richard Challis)

4.3.5

Commits

• 4569fde: remove stats option for snakemake 8 compatibility (Richard Challis)
• 068011e: Bump version: 4.3.4 → 4.3.5 (Richard Challis)

4.3.4

Commits

• 2924295: Bump version: 4.3.2 → 4.3.3 (Richard Challis)
• bcb2da6: bump blobtk version (Richard Challis)
• 0b4644d: catch invalid accession in generate config (Richard Challis)
• 73a3171: Bump version: 4.3.3 → 4.3.4 (Richard Challis)

4.3.3

Commits

• 247d646: Bump version: 4.3.1 → 4.3.2 (Richard Challis)
• ee1a3c0: fix version bump config (Richard Challis)
• 7e92097: fix version bump config (Richard Challis)
• 7fd33f7: Bump version: 4.3.1 → 4.3.2 (Richard Challis)
• 4e4d032: add wiki update script (Richard Challis)
• cca5c6d: catch value error casting empy value to float (Richard Challis)
• 3f2dd6d: Bump version: 4.3.2 → 4.3.3 (Richard Challis)

4.3.2

Commits

• dc63c0c: fix count_busco_genes for busco 5.5.0 (Richard Challis)
• da268df: fix version bump config (Richard Challis)
• 9ed7d89: fix version bump config (Richard Challis)
• 2dce491: Bump version: 4.3.1 → 4.3.2 (Richard Challis)

4.3.1

Commits

• 9cea1c2: fix chunk_fasta script for busco 5.5.0 (Richard Challis)
• 485613b: Bump version: 4.3.0 → 4.3.1 (Richard Challis)

4.3.0

Commits

• 0f608d9: update cookie banner (Richard Challis)
• 1f64063: update footer layout (Richard Challis)
• 3d274c5: add matomo tracking script (Richard Challis)
• 7e7647c: add blobtoolkit pipeline section to README (Richard Challis)
• dbc43ff: fix code block (Richard Challis)
• 17c5ee3: bump blobtk dependency (Richard Challis)
• 713c76f: Bump version: 4.2.1 → 4.3.0 (Richard Challis)