Cranfix #85
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| # This workflow uses actions that are not certified by GitHub. | |
| # They are provided by a third-party and are governed by | |
| # separate terms of service, privacy policy, and support | |
| # documentation. | |
| # | |
| # See https://github.com/r-lib/actions/tree/master/examples#readme for | |
| # additional example workflows available for the R community. | |
| name: R | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| env: | |
| BNET_FORCE_NNMF_TESTS: 0 | |
| BNET_FORCE_AUTOENCODER_TESTS: 0 | |
| BNET_FORCE_UMAP_TESTS: 0 | |
| # _R_CHECK_FORCE_SUGGESTS_: false | |
| # _R_CHECK_INSTALL_DEPENDS_: true | |
| MAKEFLAGS: "-j 2" | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| r-version: ["oldrel", "release", "devel"] | |
| # depends-only: [true, false] | |
| suggests-only: [true, false] | |
| env: | |
| # _R_CHECK_DEPENDS_ONLY_: ${{ matrix.depends-only }} | |
| _R_CHECK_SUGGESTS_ONLY_: ${{ matrix.suggests-only }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.r-version }} | |
| - name: Install System libraries | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update -y | |
| sudo apt-get install -y coinor-libclp-dev mesa-common-dev libglu1-mesa-dev python3 python3-pip python3-setuptools texlive texlive-latex-extra python3-pip ghostscript | |
| shell: sh {0} | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache-version: 1 | |
| extra-packages: | | |
| any::rcmdcheck | |
| # - name: Install dependencies | |
| # run: | | |
| # # reticulate::install_miniconda() | |
| # # reticulate::py_install("umap-learn==0.4") | |
| # # tensorflow::install_tensorflow() | |
| # # keras::install_keras() | |
| # shell: Rscript {0} | |
| - uses: r-lib/actions/check-r-package@v2 |