Merge pull request #6822 from bernt-matthias/funannotate-options

funannotate add missing loc.sample file
galaxyproject · Mar 9, 2025 · 0b67127 · 0b67127
2 parents 40350c8 + fc73a6a
commit 0b67127
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diff --git a/data_managers/data_manager_funannotate_options/.shed.yml b/data_managers/data_manager_funannotate_options/.shed.yml
@@ -4,7 +4,7 @@ description: Install funannotate databases for funannotate tool
 long_description: |
   This data managers fetches data from various databases for the funannotate
   annotation tool and updates the funannotate data table.
-name: data_manager_funannotate
+name: data_manager_funannotate_options
 owner: iuc
 remote_repository_url: https://github.com/galaxyproject/tools-iuc/tree/main/data_managers/data_manager_funannotate
 homepage_url: https://github.com/galaxyproject/tools-iuc/

diff --git a/tools/funannotate/tool-data/funannotate_options.loc.sample b/tools/funannotate/tool-data/funannotate_options.loc.sample
@@ -0,0 +1,9 @@
+# this is a tab separated file describing options available for selects in the funannotate tool
+# these options are derived separetely for each funannotate DB
+#
+# the columns are:
+# value	name	select	db_value
+#
+# db_value is the ID of the funannotate DB
+# value and name are the value and name to be used
+# select describes the command line parameter / select for which the values can be used