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erds_dnanexus

This is a github repository to store code that is needed to run an applet for ERDS cnv detection in DNAnexus. The source code of ERDs has been modified according to Trost et al., 2018.

In addition, to reduce computation in human time, it performs a headless install of SGE for SMP on a single node. This code should will work with any instance type (Ubuntu 14.04).

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Parallel ERDs for CNV detection on DNAnexus

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