v0.3.3a
Pre-release
Pre-release
fredericlemoine
released this
27 Apr 10:48
·
140 commits
to master
since this release
- Added support for IUPAC characters for
translate
command - Added
--ref-seq
option togoalign subseq
to give coordinate based on a given sequence - Added
consensus
command (simple majority consensus) - Added
goalign stats gaps
andgoalign stats mutations
commands - Added option
--per-sequences
tostats char
command - Added option
--unaligned
tosample seqs
,sample rarefy
andgoalign replace
commands - Added
goalign append
command to concatenate alignments vertically goalign compute distance
takes into account ambigous IUPAC characters for nucleotide distance computation (counting one mutation if characters are incompatibles, such as R and Y for example)