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V1.1.2 branch with many features. #637

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wants to merge 187 commits into from
Closed

V1.1.2 branch with many features. #637

wants to merge 187 commits into from

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sashakames
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@sashakames sashakames commented May 9, 2024

Description

This is the new update branch for Metagrid

Fixes #

How Has This Been Tested?

  • Local Pre-commit Checks
  • CI/CD Build

Checklist

  • My code follows the style guidelines of this project
  • I have performed a self-review of my own code
  • My changes generate no new warnings
  • If applicable - I have commented my code, particularly in hard-to-understand areas
  • If applicable - I have made corresponding changes to the documentation
  • If applicable - I have added tests that prove my fix is effective or that my feature works
  • If applicable - New and existing unit tests pass locally with my changes
  • Any dependent changes have been merged and published in downstream modules

downiec and others added 30 commits September 22, 2022 18:22
Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com>
Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com>
* enable settings on the backend for urls

* add the settings for workflow

* add missing import

* add newline
Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com>
Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com>
…environment variables. Otherwise local build of backend will fail.
…ests. Removed unneccessary type checking in the import headers of the test models. Updated coverage for some files that didn't have 100% coverage. Updated some django dependencies after testing to make sure nothing broke. Updated some deprecated imports to remove warnings. Updated pytest and coverage libraries.
…h the application from users perspective was working fine)
…nges that came with react-router-dom v6. Tests are passing now.
* Refactored the joyrideTutorials in order to reduce the chances for errors with misspelling target names. Created unique target calssnames to simplify the process of adding and using targets. Removed the chance of duplicate target names causing errors etc. Added a test startup component that should show when first opening metagrid. Startup window still needs some work to improve visuals.

* Added a welcome and changelog template component to use with thh startup display. Made the startup display change based on existing version so that a new changelog will appear when version is changed. Modified the startup component behavior to hadle a welcome and changelog template based on whether its first-time startup or not.

* Updated django-all-auth to 0.54.0

* Upgraded the antd library to latest version. Updated components to work with the latests antd library and added some styling to correct some undesired changes. Added a temporary drawer component which can be opened by clicking a new message button in the top-right navbar. Fixed some styling issues with window resizing to make the top navbar work better with smaller windows and improve visual behavior. Removed redundant components that are no longer needed with the new antd library (which is now working with typescript well). Created a popup window that shows at the start for new users. Created a startup template system that allows different templates to be used for displaying popup messages. More fixed needed for tests and the welcome popup tutorials need work.

* Worked to correct issues with tests hanging by reverting back the antd library. Also updated to node version 18. Restored previously deleted files and will remove them later when all tests are passing. Still need to correct tests to pass. Still need to complete messaging feature and update tutorial.

* Updated tests so that they pass, coverage will still be needed.

* Updated the Startup template functionality and added actions that can be triggered by the templates. Updated the welcome message buttons to work properly and select between pages to start tutorials.

* Removed redundant and unneccessary components as they are now directly taken from antd library. Removed commented out import statements.

* Refactored some names and added messages for the right drawer. Added ability to create messages for the message bar and provide content from markdown files. Updated the changelog to have useful information on latest changes. Need to troubleshoot tests and complete coverage.

* Added markdown file support for the messages. Did refactoring so messages on the right drawer and popups will show the markdown. Created new markdown files with version info and example message. Added flexibility to popup so that styles can be modified on a per message basis. Modified the changelog template and types.

* Created a new welcome tour which will show users the help buttons to encourage them to use them if they have issues. Updated the navbar tour to include the new news button. Created new test files and updated tests to bring back 100% text coverage. Removed obsolete tour target related files, as they've been updated with target object class. Troubleshooted and ran tests to fix some bugs and added more functionality for jest tests. Deleted test markdown files and updated message markdown slightly.

* modify the messages for release (#522)

---------

Co-authored-by: Sasha Ames <[email protected]>
* Refactored the joyrideTutorials in order to reduce the chances for errors with misspelling target names. Created unique target calssnames to simplify the process of adding and using targets. Removed the chance of duplicate target names causing errors etc. Added a test startup component that should show when first opening metagrid. Startup window still needs some work to improve visuals.

* Added a welcome and changelog template component to use with thh startup display. Made the startup display change based on existing version so that a new changelog will appear when version is changed. Modified the startup component behavior to hadle a welcome and changelog template based on whether its first-time startup or not.

* Updated django-all-auth to 0.54.0

* Upgraded the antd library to latest version. Updated components to work with the latests antd library and added some styling to correct some undesired changes. Added a temporary drawer component which can be opened by clicking a new message button in the top-right navbar. Fixed some styling issues with window resizing to make the top navbar work better with smaller windows and improve visual behavior. Removed redundant components that are no longer needed with the new antd library (which is now working with typescript well). Created a popup window that shows at the start for new users. Created a startup template system that allows different templates to be used for displaying popup messages. More fixed needed for tests and the welcome popup tutorials need work.

* Worked to correct issues with tests hanging by reverting back the antd library. Also updated to node version 18. Restored previously deleted files and will remove them later when all tests are passing. Still need to correct tests to pass. Still need to complete messaging feature and update tutorial.

* Updated tests so that they pass, coverage will still be needed.

* Updated the Startup template functionality and added actions that can be triggered by the templates. Updated the welcome message buttons to work properly and select between pages to start tutorials.

* Removed redundant and unneccessary components as they are now directly taken from antd library. Removed commented out import statements.

* Refactored some names and added messages for the right drawer. Added ability to create messages for the message bar and provide content from markdown files. Updated the changelog to have useful information on latest changes. Need to troubleshoot tests and complete coverage.

* Added markdown file support for the messages. Did refactoring so messages on the right drawer and popups will show the markdown. Created new markdown files with version info and example message. Added flexibility to popup so that styles can be modified on a per message basis. Modified the changelog template and types.

* Created a new welcome tour which will show users the help buttons to encourage them to use them if they have issues. Updated the navbar tour to include the new news button. Created new test files and updated tests to bring back 100% text coverage. Removed obsolete tour target related files, as they've been updated with target object class. Troubleshooted and ran tests to fix some bugs and added more functionality for jest tests. Deleted test markdown files and updated message markdown slightly.

* modify the messages for release (#522)

* Updated the node status information alert so that text displays if there is an api error.

* Updated Django to 4.1.9

* Fixed a test regarding the changes to the error message.

---------

Co-authored-by: Sasha Ames <[email protected]>
…null items don't cause an error and prevent the site from displaying.
downiec and others added 20 commits April 4, 2024 14:03
* Fixes creating files templated/generated by entrypoint
* Fixes HTML_PATH
…e to display the wget dropdown properly. With the antd update, it seems the previous method of displaying items wasn't working properly and the dropdown was showing 'no data'. Fixed this issue and set wget as the current only available download option from the search table. This can be updated later to allow for direct globus downloads.
…Only Globus related tests are failing and may need to be updated.
…es. Removed version from docker compose files.
… functions that may have been brought in by recent merge.
…plate. Also updated the add search query api call to include X-CSRFToken, to mimic what is used in the add cart item api call. Hopefully this will fix the issue with adding saved searches when logged in, need to test.
@sashakames
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sashakames commented May 9, 2024

Plan to include the following:

  • endpoint_mapping
  • Jason's changes to support Helm Charts / K8S
  • UUID error codes for Transfer failures
  • Copy Facet list
  • Open project on click ?
  • Single Dataset transfer
  • Managed Mapped endpoints
  • Any minor package updates ?
  • Developer / Operator (not user) documentation updates
  • Test suite update for coverage %
  • Revamped Collection selection and path save
  • Anything else ?
  • Version in package json and file
  • Changelog
    For sure a major release!

downiec and others added 8 commits May 9, 2024 11:22
…ovements on endpoint selection (#630)

* A minor and temporary fix for auth issue with the globus endpoint search popup. This will be addressed more elegantly in the future.

* Created some persistence related functions which will store variables in a local scope object and keep them loaded/synchronized with session storage when redirects occur. Did a rewrite of the transfer function which uses goals to keep track of what the user wanted to do between redirects. Uses local storage to save goals, as it is faster and more reliable than session storage. Consolidated and simplifed the globus transfer related data types and atoms. Globus transfers seem to be failing when testing locally, and that issue will still need to be addressed. Removed the default endpoint in favor of allowing users to save their endpoints and prefered paths, and that is then saved in session storage for when they would log in later.

* Moved the persistent storage functions to a separate file so that they can be used by other components. Re-organized the globus download steps function so that sign in tokens aren't required when setting the path of a saved endpoint. Also simplified the flow of the function to follow based on user goals rather than page state.
#649)

* Added secrets variables so that globus key and secret are available on github backend tests.

* Updated various backend packages and the backend image tag. Modified the frontend dockerfiles to use a specific image SHA, to avoid changes that break the build. Current node:latest tag was causing issues...

* Update python version used in github actions to match the version used in docker files.

* Test to see if adding setup tools will fix issue in ggithub CI. Local works fine.
…ake more sense. Updated antd package. Changed persist function into a singleton class that we can set the datastore for. It should hopefully make testing it easier.
* Removed unused react states in dataset download component. Fixed persistence issue in saved endpoints so that they aren't lost when switching to the search or other metagrid pages.

* Created several tests for the DataPersistor class in order to bring its coverage to 100%, removed unnecessary lines and if statements from the class, removed unused persistData.ts file in favor of the Persister singleton. Fixed one of the facet forms tests. More tests need to be fixed due to the updated antd library changes.

* Started work on fixing tests. Fixed failing tests in app, skipped failing test in Facets component until it can be addressed. Updated DatasetDownload component to show 'Set Path' instead of 'Set New Path' since new may imply there was a path set before.

* Fixed a couple tests, skipped a test because I couldn't figure out why it fails to run the click handler. Made the wget download successful notice match across the app. Updated the js-pkce package.

* Moved test related mock folder and files to the test folder rather that having it in the api folder. Fixed 3 tests to improve some coverage for dataset download component, created some test related functions and improvements. Fixed a frontend issue I found when no globus nodes are configured (to hide the globus ready column if it's not configured).

* Simplified and sped up some tests by initializing the cart using variables rather that by clicking the app interface. Fixed a few more tests and brought the coverage up.

* Fixed a inor bug when attempting to do Globus transfer with items that aren't globus ready. It would continue with transfer even though it shouldn't. Fixed a few more tests and updated some packages. Removed unused refreshToken variable.

* Updated to latest node:slim container

* Reverted unintentional changes to index.html

* Specified the sha for the local and production docker images.

* Fixed more tests to bring overall coverage to 89%. Created some setup functions for tests, to reduce repeated code and improve speed that tests are performed. Made some minor changes to dataset download based on things discovered during tests.

* Updated and added new tests to increase coverage for api and datasetdownload component. Fixed bug with wget download items (some undefined and null item selections were passing through to wget download causing an error). Updated server handlers for endpoint search tests. Increased timeout values for cart and app tests to see if they'll pass in github CI

* Made some changes to see if github tests will pass the way they do locally

* Refactored the App and some Cart tests, to see if they will pass on github.

* Increased time out to see if this test will resolve.

* Increased time out to see if cart item tests will resolve.

* Performed several more refactors for the tests to improve test speed and stability using best practices. Fixed a test for facets form calendar, updated jest functions and added a fix to the facet form calendar component so that the tests would pass.

* More refactors for other components and increased the timeout value for app and cart tests to see if they will pass

* Several more refactors to complete remaining tests

* Created 2 more tests to increase globus feature coverage to over 70%. Still need to troubleshoot why one test fails on github. Removed some unused atoms from globus state keys.

* Adjusted coverage thresholds from 95 to 90%, and app from 100% to 95%. These can be adjusted later when tests are added.

* Increased timeout again to see if all tests will now pass on github
@sashakames sashakames closed this Sep 19, 2024
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4 participants