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scanpy qc plots #312

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ajroura22 wants to merge 8 commits intoebi-gene-expression-group:mainebi-gene-expression-group/container-galaxy-sc-tertiary:mainfrom ajroura22:feature/scanpy_qc_plotsajroura22/container-galaxy-sc-tertiary:feature/scanpy_qc_plotsCopy head branch name to clipboard

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Commits on Oct 14, 2024

• First working versions of scanpy qc metrics script

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• initial commit for the scan qc wrapper

  

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• testing the xml

  

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• improved tests

  

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• Defining data outputs

  

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• Improvements to qc script

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• Formatting improvements

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Commits on Nov 1, 2024

• Add categories to shed.yml

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