{vis}[foss/2024a] imageio v2.36.1, scikit-image v0.25.0, sisl v0.15.2

easybuild/easyconfigs/d/dill/dill-0.3.9-GCCcore-13.3.0.eb

@@ -0,0 +1,27 @@
+# This easyconfig was created by Simon Branford of the BEAR Software team at the University of Birmingham.
+easyblock = 'PythonPackage'
+
+name = 'dill'
+version = '0.3.9'
+
+homepage = 'https://pypi.org/project/dill/'
+description = """dill extends python's pickle module for serializing and de-serializing python objects to the majority
+ of the built-in python types. Serialization is the process of converting an object to a byte stream, and the inverse
+ of which is converting a byte stream back to on python object hierarchy."""
+
+toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
+
+sources = [SOURCE_TAR_GZ]
+checksums = ['81aa267dddf68cbfe8029c42ca9ec6a4ab3b22371d1c450abc54422577b4512c']
+
+builddependencies = [('binutils', '2.42')]
+
+dependencies = [
+    ('Python', '3.12.3'),
+]
+
+use_pip = True
+download_dep_fail = True
+sanity_pip_check = True
+
+moduleclass = 'data'

easybuild/easyconfigs/i/imageio/imageio-2.36.1-gfbf-2024a.eb

@@ -0,0 +1,25 @@
+easyblock = 'PythonPackage'
+
+name = 'imageio'
+version = '2.36.1'
+
+homepage = 'https://imageio.github.io'
+description = """Imageio is a Python library that provides an easy interface to read and write a wide range of
+ image data, including animated images, video, volumetric data, and scientific formats."""
+
+toolchain = {'name': 'gfbf', 'version': '2024a'}
+
+sources = [SOURCE_TAR_GZ]
+checksums = ['e4e1d231f47f9a9e16100b0f7ce1a86e8856fb4d1c0fa2c4365a316f1746be62']
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('matplotlib', '3.9.2'),
+    ('Pillow', '10.4.0'),
+]
+
+download_dep_fail = True
+use_pip = True
+sanity_pip_check = True
+
+moduleclass = 'vis'

easybuild/easyconfigs/m/multiprocess/multiprocess-0.70.17-gfbf-2024a.eb

@@ -0,0 +1,24 @@
+easyblock = 'PythonPackage'
+
+name = 'multiprocess'
+version = '0.70.17'
+
+homepage = 'https://github.com/uqfoundation/multiprocess'
+description = "better multiprocessing and multithreading in python"
+
+toolchain = {'name': 'gfbf', 'version': '2024a'}
+
+sources = [SOURCE_TAR_GZ]
+checksums = ['4ae2f11a3416809ebc9a48abfc8b14ecce0652a0944731a1493a3c1ba44ff57a']
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('dill', '0.3.9'),
+    ('Arrow', '17.0.0'),
+]
+
+download_dep_fail = True
+use_pip = True
+sanity_pip_check = True
+
+moduleclass = 'lib'

easybuild/easyconfigs/p/PyWavelets/PyWavelets-1.8.0-foss-2024a.eb

@@ -0,0 +1,30 @@
+easyblock = 'PythonPackage'
+
+name = 'PyWavelets'
+version = '1.8.0'
+
+homepage = 'https://pywavelets.readthedocs.io'
+description = "PyWavelets is open source wavelet transform software for Python."
+
+toolchain = {'name': 'foss', 'version': '2024a'}
+
+sources = [SOURCELOWER_TAR_GZ]
+checksums = ['f3800245754840adc143cbc29534a1b8fc4b8cff6e9d403326bd52b7bb5c35aa']
+
+builddependencies = [
+    ('Cython', '3.0.10'),
+    ('meson-python', '0.16.0'),
+]
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),  # for numpy
+]
+
+download_dep_fail = True
+use_pip = True
+sanity_pip_check = True
+
+options = {'modulename': 'pywt'}
+
+moduleclass = 'lib'

easybuild/easyconfigs/p/pathos/pathos-0.3.3-foss-2024a.eb

@@ -0,0 +1,31 @@
+easyblock = 'PythonBundle'
+
+name = 'pathos'
+version = '0.3.3'
+
+homepage = 'https://pathos.readthedocs.io/'
+description = "parallel graph management and execution in heterogeneous computing"
+
+toolchain = {'name': 'foss', 'version': '2024a'}
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('multiprocess', '0.70.17'),
+]
+
+use_pip = True
+sanity_pip_check = True
+
+exts_list = [
+    ('ppft', '1.7.6.9', {
+        'checksums': ['73161c67474ea9d81d04bcdad166d399cff3f084d5d2dc21ebdd46c075bbc265'],
+    }),
+    ('pox', '0.3.5', {
+        'checksums': ['8120ee4c94e950e6e0483e050a4f0e56076e590ba0a9add19524c254bd23c2d1'],
+    }),
+    (name, version, {
+        'checksums': ['dcb2a5f321aa34ca541c1c1861011ea49df357bb908379c21dd5741f666e0a58'],
+    }),
+]
+
+moduleclass = 'tools'

easybuild/easyconfigs/s/scikit-image/scikit-image-0.25.0-foss-2024a.eb

@@ -0,0 +1,46 @@
+easyblock = 'PythonBundle'
+
+name = 'scikit-image'
+version = '0.25.0'
+
+homepage = 'https://scikit-image.org/'
+description = "scikit-image is a collection of algorithms for image processing."
+
+toolchain = {'name': 'foss', 'version': '2024a'}
+
+builddependencies = [
+    ('Cython', '3.0.10'),
+    ('meson-python', '0.16.0'),
+]
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('matplotlib', '3.9.2'),
+    ('Pillow', '10.4.0'),
+    ('networkx', '3.4.2'),
+    ('dask', '2024.9.1'),
+    ('imageio', '2.36.1'),
+    ('PyWavelets', '1.8.0'),
+]
+
+use_pip = True
+sanity_pip_check = True
+
+exts_list = [
+    ('imread', '0.7.6', {
+        'checksums': ['50b3d7089c862504c22b256ef51fe45851b34616db14c0ebfc5536001c996015'],
+    }),
+    ('tifffile', '2024.12.12', {
+        'checksums': ['c38e929bf74c04b6c8708d87f16b32c85c6d7c2514b99559ea3db8003ba4edda'],
+    }),
+    ('lazy_loader', '0.4', {
+        'checksums': ['47c75182589b91a4e1a85a136c074285a5ad4d9f39c63e0d7fb76391c4574cd1'],
+    }),
+    (name, version, {
+        'modulename': 'skimage',
+        'source_tmpl': 'scikit_image-%(version)s.tar.gz',
+        'checksums': ['58d94fea11b6b3306b3770417dc1cbca7fa9bcbd6a13945d7910399c88c2018c'],
+    }),
+]
+
+moduleclass = 'vis'

easybuild/easyconfigs/s/sisl/sisl-0.15.2-foss-2024a.eb

@@ -0,0 +1,41 @@
+easyblock = 'PythonBundle'
+
+name = 'sisl'
+version = '0.15.2'
+
+homepage = 'https://zerothi.github.io/sisl/'
+description = """sisl is an open-source easy-to-use density functional theory API
+ framework to post-analyse density functional theory codes output as well as
+ providing tight-binding calculation capabilities."""
+
+toolchain = {'name': 'foss', 'version': '2024a'}
+
+builddependencies = [
+    ('scikit-build-core', '0.10.6'),
+    ('Cython', '3.0.10'),
+]
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('ASE', '3.23.0'),
+    ('netcdf4-python', '1.7.1.post2'),
+    ('plotly.py', '5.24.1'),
+    ('pathos', '0.3.3'),
+    ('scikit-image', '0.25.0'),
+    ('tqdm', '4.66.5'),
+    ('xarray', '2024.11.0'),
+]
+
+use_pip = True
+sanity_pip_check = True
+
+exts_list = [
+    ('nodify', '0.0.11', {
+        'checksums': ['b448c12fc637e890e743a8d2e1aec86e29e6cda5c30d6b7a4495461780dd90ac'],
+    }),
+    (name, version, {
+        'checksums': ['3fa96caab2bffe5144b2dd8713094295b1db7de3272257fea39acebda04326e0'],
+    }),
+]
+
+moduleclass = 'phys'