Trr tests implementation in the core nectarchain module

[guillaumegrolleron]

This PR change the location of the TRR test suite into the main module with a dedicated submodule trr_test_suite.

I change the PyQt dependencies to the version 6 too.

[codecov]

Codecov Report

Attention: Patch coverage is 0% with 42 lines in your changes missing coverage. Please review.

Project coverage is 48.81%. Comparing base (bac8691) to head (f9f0e39).
Report is 1 commits behind head on main.

Files with missing lines	Patch %	Lines
src/nectarchain/trr_test_suite/gui.py	0.00%	17 Missing ⚠️
src/nectarchain/trr_test_suite/tools_components.py	0.00%	8 Missing ⚠️
src/nectarchain/trr_test_suite/linearity.py	0.00%	3 Missing ⚠️
...chain/trr_test_suite/pix_couple_tim_uncertainty.py	0.00%	3 Missing ⚠️
src/nectarchain/trr_test_suite/__init__.py	0.00%	2 Missing ⚠️
src/nectarchain/trr_test_suite/deadtime.py	0.00%	2 Missing ⚠️
src/nectarchain/trr_test_suite/pedestal.py	0.00%	2 Missing ⚠️
.../nectarchain/trr_test_suite/pix_tim_uncertainty.py	0.00%	2 Missing ⚠️
src/nectarchain/trr_test_suite/trigger_timing.py	0.00%	2 Missing ⚠️
src/nectarchain/trr_test_suite/utils.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@             Coverage Diff             @@
##             main     #173       +/-   ##
===========================================
- Coverage   63.24%   48.81%   -14.44%     
===========================================
  Files          64       76       +12     
  Lines        4734     6236     +1502     
===========================================
+ Hits         2994     3044       +50     
- Misses       1740     3192     +1452     

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[jlenain]

Grrr... I think something is still missing in the environment recipes. Trying with a fresh conda environment, I get:

python gui.py
Traceback (most recent call last):
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/gui.py", line 12, in <module>
    from PyQt6.QtCore import QProcess, QTimer
ImportError: /usr/lib/x86_64-linux-gnu/libQt6Core.so.6: version `Qt_6.8' not found (required by /home/jlenain/local/opt/mambaforge/envs/delme/lib/python3.11/site-packages/PyQt6/QtCore.abi3.so)

[guillaumegrolleron]

Grrr... I think something is still missing in the environment recipes. Trying with a fresh conda environment, I get:

python gui.py
Traceback (most recent call last):
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/gui.py", line 12, in <module>
    from PyQt6.QtCore import QProcess, QTimer
ImportError: /usr/lib/x86_64-linux-gnu/libQt6Core.so.6: version `Qt_6.8' not found (required by /home/jlenain/local/opt/mambaforge/envs/delme/lib/python3.11/site-packages/PyQt6/QtCore.abi3.so)

However it works with the CI...

[jlenain]

Grrr... I think something is still missing in the environment recipes. Trying with a fresh conda environment, I get:

python gui.py
Traceback (most recent call last):
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/gui.py", line 12, in <module>
    from PyQt6.QtCore import QProcess, QTimer
ImportError: /usr/lib/x86_64-linux-gnu/libQt6Core.so.6: version `Qt_6.8' not found (required by /home/jlenain/local/opt/mambaforge/envs/delme/lib/python3.11/site-packages/PyQt6/QtCore.abi3.so)

However it works with the CI...

Right, but in CI, we do not try to open the GUI of the TRR suite. And here, it is the import to PyQt6.QtCore which fails, which is not used in unit tests, if I am correct.

[jlenain]

Hum, from a fresh environment:

mamba env create --name delme --file environment.yml
mamba activate delme
pip install -e .

launching the TRR GUI still fails because of pyqtgraph dependency via src/nectarchain/makers/component/spe/spe_algorithm.py:

python src/nectarchain/trr_test_suite/gui.py
2025-02-05 15:01:07,411 nectarchain.data.management WARNING DIRAC probably not installed
Traceback (most recent call last):
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/gui.py", line 51, in <module>
    import nectarchain.trr_test_suite.deadtime as deadtime
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/__init__.py", line 1, in <module>
    from .gui import TestRunner
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/gui.py", line 51, in <module>
    import nectarchain.trr_test_suite.deadtime as deadtime
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/deadtime.py", line 13, in <module>
    from nectarchain.trr_test_suite.tools_components import DeadtimeTestTool
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/trr_test_suite/tools_components.py", line 17, in <module>
    from nectarchain.makers import EventsLoopNectarCAMCalibrationTool
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/makers/__init__.py", line 5, in <module>
    from .charges_makers import ChargesNectarCAMCalibrationTool
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/makers/charges_makers.py", line 20, in <module>
    from .component import ChargesComponent, NectarCAMComponent
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/makers/component/__init__.py", line 3, in <module>
    from .flatfield_spe_component import (
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/makers/component/flatfield_spe_component.py", line 12, in <module>
    from .spe import SPECombinedalgorithm  # noqa: F401
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/makers/component/spe/__init__.py", line 1, in <module>
    from .spe_algorithm import (
  File "/home/jlenain/local/src/python/cta-observatory/nectarchain/src/nectarchain/makers/component/spe/spe_algorithm.py", line 15, in <module>
    import pyqtgraph as pg
  File "/home/jlenain/local/opt/mambaforge/envs/delme/lib/python3.11/site-packages/pyqtgraph/__init__.py", line 18, in <module>
    from .colors import palette
  File "/home/jlenain/local/opt/mambaforge/envs/delme/lib/python3.11/site-packages/pyqtgraph/colors/palette.py", line 1, in <module>
    from ..Qt import QtGui
  File "/home/jlenain/local/opt/mambaforge/envs/delme/lib/python3.11/site-packages/pyqtgraph/Qt/__init__.py", line 184, in <module>
    import PyQt6.QtCore
ImportError: /usr/lib/x86_64-linux-gnu/libQt6Core.so.6: version `Qt_6.8' not found (required by /home/jlenain/local/opt/mambaforge/envs/delme/lib/python3.11/site-packages/PyQt6/QtCore.abi3.so)