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protein-detection

This project focuses on developing deep learning models to detect protein structures directly from cryo-electron tomography (cryo-ET) data of synaptic regions.

THIS IS WORK IN PROGRESS!

Installation

  • Make sure conda or mamba is installed.
    • If you don't have a conda installation yet we recommend micromamba
  • Create the environment with all required dependencies: mamba env create -f environment.yaml
  • Activate the environment: mamba activate protein-detection
  • Install the package: pip install -e .

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