OlfactoryReceptors

Machine learning prediction of olfactory receptor (OR) functions from the sequence alignment

Workflow

A Jupyter notebook and the output .html demonstrate the workflow of predicting OR responses to odorants:

• Response_to_odorants.ipynb
• Response_to_odorants.html

Prerequisites

R version 3.5 or higher R packages:

• caret

• MLmetics

• e1071

• bio3d

• stringr

• ggpubr

• ggplot2

• gridExtra

To install the above packages for Jupyter, use Conda, e.g.

conda install r-MLmetrics
conda install -c conda-forge r-ggpubr
...

Author

• Xiaojing Cong - Initial work - ChemoSimLab

Reference