Code

Changes from CCI branch to main#11

Code

Merged

dwest77a merged 22 commits intodevcedadev/padocc:devfrom cci_casescedadev/padocc:cci_casesCopy head branch name to clipboardMar 6, 2024

+5,487-5,989

Commits

Commits on Feb 21, 2024

• Integration of blacklist into progress tracker

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• Added dryrun carrythrough

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• Overhauled dimension handling and added extra functions, scanning now utilises dimension checks

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• Added functionality for dimension highlighting and concatenation testing within scanning phase

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• Added multiple nan-type checks

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• Added concat fatal error for l2 data

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• Integration with other pipeline functions

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Commits on Mar 6, 2024

• Added blacklist/virtual support, reading log and status files

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• Minor changes experimenting with streamline/dependency - abandoned

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• Removed error and output log options per job

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• Set up a dedicated place for config files

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• Organised multi-purpose functions to a single script within the pipeline

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• Initialised allocator script

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• Moved scripts

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• Added requirements that were misplaced

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• Added new features; loading and creating refs as required, saving refs once created, minor variable changes

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• Added file handling and status logging

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• Updated import locations

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• Removed scanfile skip option

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• Added file handlers and status logging, also pass/fail counters

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• Added test/example notebooks

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• Updated with comments and rearranged sections

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