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BSD 3-Clause License | ||
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Copyright (c) 2023-2024, Centre of Environmental Data Analysis Developers, | ||
Scientific and Technical Facilities Council (STFC), | ||
UK Research and Innovation (UKRI). | ||
All rights reserved. | ||
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Redistribution and use in source and binary forms, with or without | ||
modification, are permitted provided that the following conditions are met: | ||
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1. Redistributions of source code must retain the above copyright notice, this | ||
list of conditions and the following disclaimer. | ||
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2. Redistributions in binary form must reproduce the above copyright notice, this | ||
list of conditions and the following disclaimer in the documentation and/or other | ||
materials provided with the distribution. | ||
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3. Neither the name of the copyright holder nor the names of its contributors | ||
may be used to endorse or promote products derived from this software without | ||
specific prior written permission. | ||
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THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS “AS IS” | ||
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE | ||
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE | ||
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL | ||
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR | ||
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER | ||
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, | ||
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE | ||
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. |
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# DataPoint package | ||
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A package to be installed into Jaspy that enables the use of CEDA search and cloud data services: | ||
- Search the CEDA STAC catalog for relevant data. | ||
- Port the data into an Xarray object from multiple sources. |
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from .core import DataPoint |
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class DataPoint: | ||
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def __init__(self): | ||
pass | ||
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def search(self, **kwargs): | ||
return None | ||
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def to_xarray(self, **kwargs): | ||
return None |
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"# CEDA DataPoint - Demonstration\n", | ||
"\n", | ||
"The CEDA DataPoint module wraps both the ``pystac_client`` and ``xarray`` packages into a single container for searching and accessing data. This notebook shows how methods function in DataPoint." | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"from datapoint import DataPoint\n", | ||
"\n", | ||
"client = DataPoint() # All public connection kwargs are known by default for CEDA" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"# Same as normal for pystac_client\n", | ||
"\n", | ||
"for coll in client.get_collections():\n", | ||
" print(f\"{coll.id}: {coll.description}\")\n", | ||
"\n", | ||
"# Return a new client with a specified collection to search for - or results from pystac_client? (Could load lazily?)\n", | ||
"sentinel2_ard = client.get_collection('sentinel2_ard')\n", | ||
"\n", | ||
"# Make this a function or similar.\n", | ||
"sentinel2_ard.extent.spatial.bboxes" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"# Returns a new datapoint.SearchResult object. Inheritance for DataPoint, SearchResult from a general object type.\n", | ||
"item_search = client.search(\n", | ||
" collections=['sentinel2_ard'],\n", | ||
" datetime=\"2023-01-01/2023-02-28\",\n", | ||
" max_items=10,\n", | ||
")" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"items = list(item_search.items())\n", | ||
"items" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"# Make all the properties into actual class properties?\n", | ||
"for item in items:\n", | ||
" print(item.properties[\"start_datetime\"], item.properties[\"end_datetime\"])" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"# Useful method for matching to catalog\n", | ||
"item_search.url_with_parameters()\n", | ||
"item_search.get_dois() # List item DOIs" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"# Assemble xarray and other datasets\n", | ||
"item_search.get_datasets()\n", | ||
"\n", | ||
"# Could have datasets from multiple sources in the same Xarray object?" | ||
] | ||
} | ||
], | ||
"metadata": { | ||
"language_info": { | ||
"name": "python" | ||
} | ||
}, | ||
"nbformat": 4, | ||
"nbformat_minor": 2 | ||
} |
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