Build and Test GATK 4

Removes unnecessary and buggy validation check #3388

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Triggered via pull request November 12, 2023 13:54

ilyasoifer

opened #8580

Ultimagen:ilyasoifer/validate.key.fix

Status Failure

Total duration 1h 30m 33s

Artifacts 7

This run and associated checks have been archived and are scheduled for deletion. Learn more about checks retention

gatk-tests.yml

on: pull_request

check if the environment has privileges

build and push gatk docker to artifacts

Validate script WDLs using womtools

Validate generated WDLs using womtools

Matrix: wdlTests

Matrix: test

Matrix: testOnDocker

Annotations

2 errors and 1 warning

Java 17.0.6+10 build and test integration

Process completed with exit code 1.

Java 17.0.6+10 test on docker integration

Process completed with exit code 1.

Java 17.0.6+10 build and test cloud

No files were found with the provided path: build/reports/tests. No artifacts will be uploaded.

Artifacts

Produced during runtime

Name	Size
gatkDockerImage Expired	2.11 GB
test-results-17.0.6+10-integration Expired	360 MB
test-results-17.0.6+10-unit Expired	156 MB
test-results-docker-17.0.6+10-conda Expired	282 KB
test-results-docker-17.0.6+10-integration Expired	360 MB
test-results-docker-17.0.6+10-unit Expired	154 MB
test-results-docker-17.0.6+10-variantcalling Expired	235 KB