v1.2

Remove unsupported pyvcf dependency for VCF output, and use pysam instead.

Should fix pip install strainge again.

v1.1.5

Add NumPy as runtime dependency to fix PyPI package

v1.1.4

v1.1.4.1

Properly check whether fingerprint is set

v1.1.3

Fix some edge cases where strains were incorrectly assigned a very low abundance.

StrainGE v1.1.2

Don't perform relative abundance calculation if no strains identified.

StrainGE v1.1.1

Fix use of wrong variable name

StrainGE 1.1

• Improved relative abundance calculation
• Various bugfixes and improvements

v1.0.3

• Fix numpy build dependency (pypa/pip#9542)
• Fix issue with uninitialized matrix entries in cluster
• Fix some over-agressive database pruning strategies

StrainGE 1.0.2

Packaging improvements. First Zenodo archived release.

StrainGE 1.0.1

Packing improvements