Update 10.5281/zenodo.5749843

bioimage-io · Oct 24, 2023 · 343c006 · 343c006
1 parent abca5b0
commit 343c006
Showing 1 changed file with 68 additions and 32 deletions.
diff --git a/collection/10.5281/zenodo.5749843/resource.yaml b/collection/10.5281/zenodo.5749843/resource.yaml
@@ -1,32 +1,68 @@
-doi: 10.5281/zenodo.5749843
-id: 10.5281/zenodo.5749843
-nickname: humorous-owl
-nickname_icon: "\U0001F989"
-owners: [252845]
-status: accepted
-type: model
-versions:
-- created: '2022-01-21 14:50:48.356997'
-  description: A 3D U-net to predict cell membranes in plant tissues, trained on volumes
-    of Arabidopsis thaliana ovules acquired on a confocal microscope.
-  doi: 10.5281/zenodo.5888237
-  links: [imjoy/BioImageIO-Packager, ilastik/ilastik, deepimagej/deepimagej, zero/notebook_u-net_3d_zerocostdl4mic]
-  name: Cell Segmentation from Membrane Staining for Plant Tissues
-  rdf_source: https://zenodo.org/api/records/5888237/files/rdf.yaml/content
-  status: accepted
-  tags: [zerocostdl4mic, deepimagej, segmentation, 3d, unet, fluorescence-light-microscopy,
-    cell-membrane, plant, arabidopsis, tensorflow]
-  training_data: {id: ilastik/plantseg_ovules}
-  version_id: '5888237'
-  version_name: revision 1
-- created: '2022-01-19 10:16:02.455027'
-  doi: 10.5281/zenodo.5877226
-  links: [imjoy/BioImageIO-Packager, ilastik/ilastik, deepimagej/deepimagej]
-  name: 3D UNet - arabidopsis - ZeroCostDL4Mic
-  rdf_source: https://zenodo.org/api/files/3759664b-38bf-4ba8-b61d-b017dcf420d1/rdf.yaml
-  status: accepted
-  version_id: '5877226'
-  version_name: revision 2
-- {created: '2021-12-02 14:27:16.753974+00:00', doi: 10.5281/zenodo.5749844, name: 3D
-    UNet - arabidopsis - ZeroCostDL4Mic, rdf_source: 'https://zenodo.org/api/files/3320859e-af1a-45bc-bfaa-3d4110b3bc41/rdf.yaml',
-  status: blocked, version_id: '5749844', version_name: revision 1}
+doi: 10.5281/zenodo.5749843
+id: 10.5281/zenodo.5749843
+nickname: humorous-owl
+nickname_icon: 🦉
+owners:
+- 252845
+status: accepted
+type: model
+versions:
+- created: '2022-01-21 14:50:48.356997'
+  description: A 3D U-net to predict cell membranes in plant tissues, trained on volumes
+    of Arabidopsis thaliana ovules acquired on a confocal microscope.
+  doi: 10.5281/zenodo.5888237
+  links:
+  - imjoy/BioImageIO-Packager
+  - ilastik/ilastik
+  - deepimagej/deepimagej
+  - zero/notebook_u-net_3d_zerocostdl4mic
+  name: Cell Segmentation from Membrane Staining for Plant Tissues
+  status: accepted
+  tags:
+  - zerocostdl4mic
+  - deepimagej
+  - segmentation
+  - 3d
+  - unet
+  - fluorescence-light-microscopy
+  - cell-membrane
+  - plant
+  - arabidopsis
+  - tensorflow
+  training_data:
+    id: ilastik/plantseg_ovules
+  version_id: '5888237'
+  version_name: revision 1
+  rdf_source: https://zenodo.org/api/records/5888237/files/rdf.yaml/content
+- created: '2022-01-19 10:16:02.455027'
+  doi: 10.5281/zenodo.5877226
+  name: 3D UNet - arabidopsis - ZeroCostDL4Mic
+  status: accepted
+  version_id: '5877226'
+  version_name: version from 2022-01-19
+  rdf_source: https://zenodo.org/api/records/5877226/files/rdf.yaml/content
+- created: '2022-01-19 10:16:02.455027'
+  doi: 10.5281/zenodo.5877226
+  links:
+  - imjoy/BioImageIO-Packager
+  - ilastik/ilastik
+  - deepimagej/deepimagej
+  name: 3D UNet - arabidopsis - ZeroCostDL4Mic
+  status: accepted
+  version_id: '5877226'
+  version_name: revision 2
+  rdf_source: https://zenodo.org/api/files/3759664b-38bf-4ba8-b61d-b017dcf420d1/rdf.yaml
+- created: '2021-12-02 14:27:16.753974+00:00'
+  doi: 10.5281/zenodo.5749844
+  name: 3D UNet - arabidopsis - ZeroCostDL4Mic
+  status: blocked
+  version_id: '5749844'
+  version_name: revision 1
+  rdf_source: https://zenodo.org/api/files/3320859e-af1a-45bc-bfaa-3d4110b3bc41/rdf.yaml
+- created: '2021-12-02 14:27:16.753974'
+  doi: 10.5281/zenodo.5749844
+  name: 3D UNet - arabidopsis - ZeroCostDL4Mic
+  status: accepted
+  version_id: '5749844'
+  version_name: version from 2021-12-02
+  rdf_source: https://zenodo.org/api/records/5749844/files/rdf.yaml/content