Build and Upload Models #1429
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| name: Build and Upload Models | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| schedule: | |
| - cron: '0 1,13 * * *' | |
| jobs: | |
| # Label of the container job | |
| build-and-upload: | |
| # You must use a Linux environment when using service containers or container jobs | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/[email protected] | |
| - name: Deploy bioengine-model-runner | |
| uses: jakejarvis/s3-sync-action@master | |
| if: github.ref == 'refs/heads/main' | |
| env: | |
| AWS_S3_ENDPOINT: ${{ secrets.S3_ENDPOINT }} | |
| AWS_S3_BUCKET: model-repository | |
| AWS_ACCESS_KEY_ID: ${{ secrets.S3_KEY }} | |
| AWS_SECRET_ACCESS_KEY: ${{ secrets.S3_SECRET }} | |
| AWS_REGION: 'us-west-1' # optional: defaults to us-east-1 | |
| SOURCE_DIR: './src/bioengine-model-runner' # optional: defaults to entire repository | |
| DEST_DIR: "bioengine-model-runner" | |
| - name: Set up Python | |
| uses: actions/[email protected] | |
| with: | |
| python-version: 3.8 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install numpy tqdm requests boto3 ruamel.yaml jinja2 pytest pytest-asyncio imjoy-rpc | |
| - name: Convert models | |
| run: python scripts/export_model_to_triton.py --download-weights --upload --skip-exists --remove-after-upload --endpoint-url=${{ secrets.S3_ENDPOINT }} --access-key-id=${{ secrets.S3_KEY }} --secret-access-key=${{ secrets.S3_SECRET }} --bucket=model-repository --prefix= | |
| - name: Deploy model repository manifest to gh-pages 🚀 | |
| if: github.ref == 'refs/heads/main' | |
| uses: JamesIves/[email protected] | |
| with: | |
| clean: false | |
| branch: gh-pages | |
| folder: dist | |
| - name: Test Triton models | |
| if: github.ref == 'refs/heads/main' | |
| run: python scripts/test-triton-models.py |