auxiliary package to interface with navis and fafbseg
neurometry/cave.py
- How to interact with the CAVEClient to:
- extract cutouts from FAFB (Flywire)
- access predicted synapse table
- access predicted neurotransmitter per synapse
- access cell identity table
- filter said tables
neurometry/ic.py
- How to interact with the imageryclient to:
- access segmentation layer
- access raw image
- create masks
- plot accessed data and overlays
neurometry/ml.py
- How to create an example CNN architecture
- How to use a image augmentation library
neutrometry/viz.py
- Helper functions to plot pie charts, scattergrams, bar charts, histograms, heatmaps