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Documenter.jl committed Dec 29, 2024
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2 changes: 1 addition & 1 deletion dev/.documenter-siteinfo.json
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{"documenter":{"julia_version":"1.11.2","generation_timestamp":"2024-12-28T01:23:27","documenter_version":"1.8.0"}}
{"documenter":{"julia_version":"1.11.2","generation_timestamp":"2024-12-29T01:37:15","documenter_version":"1.8.0"}}
2 changes: 1 addition & 1 deletion dev/api/index.html
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x = rand(proposal, 1_000, 100)
log_ratios = logpdf.(target, x) .- logpdf.(proposal, x)
result = psis(log_ratios)
paretoshapeplot(result)</code></pre><p>We can also plot the Pareto shape parameters directly:</p><pre><code class="language-julia hljs">paretoshapeplot(result.pareto_shape)</code></pre><p>We can also use <code>plot</code> directly:</p><pre><code class="language-julia hljs">plot(result.pareto_shape; showlines=true)</code></pre></div><a class="docs-sourcelink" target="_blank" href="https://github.com/arviz-devs/PSIS.jl/blob/41c6f038e6328c3520737be7036bc8e906ab36ea/src/recipes/plots.jl#L11-L49">source</a></section></article></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../plotting/">« Plotting</a><a class="docs-footer-nextpage" href="../internal/">Internal »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Saturday 28 December 2024 01:23">Saturday 28 December 2024</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
paretoshapeplot(result)</code></pre><p>We can also plot the Pareto shape parameters directly:</p><pre><code class="language-julia hljs">paretoshapeplot(result.pareto_shape)</code></pre><p>We can also use <code>plot</code> directly:</p><pre><code class="language-julia hljs">plot(result.pareto_shape; showlines=true)</code></pre></div><a class="docs-sourcelink" target="_blank" href="https://github.com/arviz-devs/PSIS.jl/blob/41c6f038e6328c3520737be7036bc8e906ab36ea/src/recipes/plots.jl#L11-L49">source</a></section></article></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../plotting/">« Plotting</a><a class="docs-footer-nextpage" href="../internal/">Internal »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Sunday 29 December 2024 01:37">Sunday 29 December 2024</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion dev/index.html
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(-Inf, 0.5] good 7 (23.3%) 959
(0.5, 0.7] okay <span class="sgr33">13 (43.3%)</span> 938
(0.7, 1] bad <span class="sgr91"><span class="sgr1"> 9 (30.0%)</span></span> ——
(1, Inf) very bad <span class="sgr31"><span class="sgr1"> 1 (3.3%) </span></span> ——</code></pre><p>As indicated by the warnings, this is a poor choice of a proposal distribution, and estimates are unlikely to converge (see <a href="api/#PSIS.PSISResult"><code>PSISResult</code></a> for an explanation of the shape thresholds).</p><p>When running PSIS with many parameters, it is useful to plot the Pareto shape values to diagnose convergence. See <a href="plotting/#Plotting-PSIS-results">Plotting PSIS results</a> for examples.</p></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="plotting/">Plotting »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Saturday 28 December 2024 01:23">Saturday 28 December 2024</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
(1, Inf) very bad <span class="sgr31"><span class="sgr1"> 1 (3.3%) </span></span> ——</code></pre><p>As indicated by the warnings, this is a poor choice of a proposal distribution, and estimates are unlikely to converge (see <a href="api/#PSIS.PSISResult"><code>PSISResult</code></a> for an explanation of the shape thresholds).</p><p>When running PSIS with many parameters, it is useful to plot the Pareto shape values to diagnose convergence. See <a href="plotting/#Plotting-PSIS-results">Plotting PSIS results</a> for examples.</p></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="plotting/">Plotting »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Sunday 29 December 2024 01:37">Sunday 29 December 2024</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion dev/internal/index.html
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218 changes: 109 additions & 109 deletions dev/plotting/25bac59b.svg → dev/plotting/a384adae.svg
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2 changes: 1 addition & 1 deletion dev/plotting/index.html
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Expand Up @@ -11,4 +11,4 @@
(-Inf, 0.5] good 4 (20.0%) 959
(0.5, 0.7] okay <span class="sgr33">9 (45.0%)</span> 938
(0.7, 1] bad <span class="sgr91"><span class="sgr1">7 (35.0%)</span></span> ——</code></pre><h2 id="Plots.jl"><a class="docs-heading-anchor" href="#Plots.jl">Plots.jl</a><a id="Plots.jl-1"></a><a class="docs-heading-anchor-permalink" href="#Plots.jl" title="Permalink"></a></h2><p><code>PSISResult</code> objects can be plotted directly:</p><pre><code class="language-julia hljs">using Plots
plot(result; showlines=true, marker=:+, legend=false, linewidth=2)</code></pre><img src="25bac59b.svg" alt="Example block output"/><p>This is equivalent to calling <code>PSISPlots.paretoshapeplot(result; kwargs...)</code>.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../">« Home</a><a class="docs-footer-nextpage" href="../api/">API »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Saturday 28 December 2024 01:23">Saturday 28 December 2024</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
plot(result; showlines=true, marker=:+, legend=false, linewidth=2)</code></pre><img src="a384adae.svg" alt="Example block output"/><p>This is equivalent to calling <code>PSISPlots.paretoshapeplot(result; kwargs...)</code>.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../">« Home</a><a class="docs-footer-nextpage" href="../api/">API »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Sunday 29 December 2024 01:37">Sunday 29 December 2024</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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