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Integration test for run_dicom_archive_loader.py #1203

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merged 15 commits into from
Dec 17, 2024

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@maximemulder maximemulder commented Oct 18, 2024

This PR mounts the S3 bucket in CI and adds an integration test for run_dicom_archive_loader.py !

@maximemulder maximemulder added the Area: CI PR or issue related to continuous integration, including automated tests and static checks label Oct 18, 2024
@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch from 5586936 to 857053b Compare October 18, 2024 20:27
@maximemulder maximemulder changed the title Use Raisinbread tests in integration tests Use Raisinbread files in integration tests Oct 18, 2024
@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch from 857053b to b73ecff Compare October 18, 2024 20:34
@maximemulder maximemulder changed the title Use Raisinbread files in integration tests Use imaging files in integration tests Oct 18, 2024
@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch 25 times, most recently from 63dc912 to 25bd52d Compare October 18, 2024 22:15
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There is now a test to check that a file has indeed been inserted in the database !

@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch 2 times, most recently from 52ef719 to 632b453 Compare December 4, 2024 15:57
@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch from 632b453 to e649bcd Compare December 4, 2024 16:02
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Wait, this is not Samir's brain, someone lied to me !!!

image

@maximemulder maximemulder marked this pull request as draft December 6, 2024 15:37
@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch from 7ea8ec7 to c192ce4 Compare December 6, 2024 15:42
@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch from 50bc15a to a0cd5f3 Compare December 17, 2024 19:55
@maximemulder maximemulder force-pushed the 2024-10-18_integration-s3 branch from a0cd5f3 to 8bf736f Compare December 17, 2024 20:08
@maximemulder maximemulder requested a review from laemtl December 17, 2024 20:13
@maximemulder maximemulder marked this pull request as ready for review December 17, 2024 20:24
@maximemulder maximemulder dismissed cmadjar’s stale review December 17, 2024 20:59

comment addressed

@maximemulder maximemulder merged commit f70159f into aces:main Dec 17, 2024
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maximemulder added a commit to maximemulder/Loris-MRI that referenced this pull request Dec 17, 2024
add integration test

put keys in github repo

debugging

add database check

add comments and debugging

remove s3 keys

change converter in test

check file tree

fix doc

fix docs 2

rename variable

go back to using s3 keys

fix path

try fix
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3 participants