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1. heterogeneous-exposure-hons heterogeneous-exposure-hons Public

   Forked from gstonge/heterogeneous-exposure-hons

   Modules and scripts to model contagions on higher-order networks with heterogeneous exposure

   Python 1

2. tsir tsir Public

   Forked from pholme/tsir

   Fast code for SIR on temporal networks

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3. Intro-PMCMC Intro-PMCMC Public

   Forked from akira-endo/Intro-PMCMC

   Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.

   HTML

4. simplagion simplagion Public

   Forked from iaciac/simplagion

   Code associated to the paper 'Simplicial models of social contagion' Nat. Commun. (2019)

   Jupyter Notebook

5. Optimal_resource Optimal_resource Public

   MATLAB scripts for generating the figures presented in the manuscript "Quantification of optimal resource allocation strategies for controlling epidemics"

   MATLAB

6. Rate-Of-Incidence-EWS Rate-Of-Incidence-EWS Public

   Forked from ersouthall/Rate-Of-Incidence-EWS

   code to accompany "Prospects for detecting early warning signals in discrete event sequence data: application to epidemiological incidence data."

   Jupyter Notebook