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kelly-sovacool committed Jan 21, 2025
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# XAVIER - e**X**ome **A**nalysis and **V**ariant explor**ER** 🔬
# XAVIER

e**X**ome **A**nalysis and **V**ariant explor**ER** 🔬

[![tests](https://github.com/CCBR/XAVIER/workflows/tests/badge.svg)](https://github.com/CCBR/XAVIER/actions/workflows/main.yaml)
[![docs](https://github.com/CCBR/XAVIER/workflows/docs/badge.svg)](https://github.com/CCBR/XAVIER/actions/workflows/docs-mkdocs.yml)
[![Docker Pulls](https://img.shields.io/docker/pulls/nciccbr/ccbr_wes_base)](https://hub.docker.com/r/nciccbr/ccbr_wes_base)
[![GitHub Issues](https://img.shields.io/github/issues/CCBR/XAVIER?color=brightgreen)](https://github.com/CCBR/XAVIER/issues)
[![MIT license](https://img.shields.io/github/license/CCBR/XAVIER)](https://github.com/CCBR/XAVIER/blob/main/LICENSE)
[![docs](https://github.com/CCBR/XAVIER/workflows/docs/badge.svg)](https://ccbr.github.io/XAVIER)
[![issues](https://img.shields.io/github/issues/CCBR/XAVIER?color=brightgreen)](https://github.com/CCBR/XAVIER/issues)
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[![release](https://img.shields.io/github/v/release/CCBR/XAVIER?color=blue&label=latest%20release)](https://github.com/CCBR/XAVIER/releases/latest)

> **_*XAVIER - eXome Analysis and Variant explorER*_**. This is the home of the pipeline, XAVIER. Its long-term goals: to accurately call germline and somatic variants, to infer CNVs, and to boldly annotate variants like no pipeline before!
This is the home of the XAVIER pipeline.
Its long-term goals: to accurately call germline and somatic variants,
to infer CNVs, and to boldly annotate variants like no pipeline before!

## Overview

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