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  1. EBI-Metagenomics/assembly_uploader EBI-Metagenomics/assembly_uploader Public

    Upload of metagenome and metatranscriptome assemblies to ENA

    Python

  2. EBI-Metagenomics/microeuks-gene-benchmarker EBI-Metagenomics/microeuks-gene-benchmarker Public

    Scripts to benchmark the outputs from gene annotation tools for microbial eukaryotes

    Nextflow

  3. EBI-Metagenomics/pipeline-v5 EBI-Metagenomics/pipeline-v5 Public

    This repository contains all CWL descriptions of the MGnify pipeline version 5.0.

    HTML 23 21

  4. EBI-Metagenomics/holofood-course EBI-Metagenomics/holofood-course Public

    ReadTheDocs/Sphinx documentation source for the "Organisation and utilisation of hologenomic datasets" Holofood course, 2022

    HTML 3