Code

PR for release#51

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Merged

erinyoung merged 24 commits intomainUPHL-BioNGS/Donut_Falls:mainfrom awsUPHL-BioNGS/Donut_Falls:awsCopy head branch name to clipboardMay 9, 2024

+1,083-429

Commits

Commits on Mar 6, 2024

• config file for AWS healthomics

  erinyoung

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  b04ef65

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• added run files and ext.args

  erinyoung

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  8a0e025

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• updated to new version

  erinyoung

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  ed575a7

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• removed unused task.ext.args

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  committed
  4dd8f7a

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• added default

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  d4ac13a

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Commits on Mar 12, 2024

• updated directories

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  efa2eed

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• fixed typo in campy config

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  ce288ec

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• added saveAs

  erinyoung

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  f7b4f59

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Commits on Apr 30, 2024

• adding mash dist

  erinyoung

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  1ac3e60

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• bumped version

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  bec0084

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• added mash

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  369187f

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Commits on May 1, 2024

• changed NF to $NF

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  eb1d499

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Commits on May 7, 2024

• removed usage increase

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  9940715

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• combined bandage graphs per sample

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  e515b48

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• adding fastp to summary

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  0860787

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Commits on May 8, 2024

• added illumina numbers and tsv

  erinyoung

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  b06b45c

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• added png

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  9f3ea99

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• redid summary function

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  2583271

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• fixed example

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  d46004e

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• added link for evaulation

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  13f31c9

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• Merge branch 'main' into aws

  erinyoung

  authored
  9cdac6d

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• fixed comma

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  9536dff

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Commits on May 9, 2024

• added loops to summary

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  e954823

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• added time increase for task.attempt

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  committed
  205f253

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