increased cpus

UPHL-BioNGS · Mar 5, 2024 · f0a09ce · f0a09ce
1 parent 8018619
commit f0a09ce
Showing 1 changed file with 7 additions and 7 deletions.
diff --git a/.github/workflows/github_actions.config b/.github/workflows/github_actions.config
@@ -10,12 +10,12 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:bwa{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:circulocov{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -34,7 +34,7 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:flye{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -49,12 +49,12 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:medaka{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:multiqc{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -84,7 +84,7 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:raven{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
@@ -93,7 +93,7 @@ process {
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}
 	withName:unicycler{
-		cpus=2
+		cpus=3
 		memory = { 6.GB * task.attempt }
 		errorStrategy = { task.attempt < 2 ? 'retry' : 'terminate'}
 	}