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changed assembler to visible
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k-florek committed May 1, 2024
1 parent 697da4c commit 42ad604
Showing 1 changed file with 3 additions and 10 deletions.
13 changes: 3 additions & 10 deletions nextflow_schema.json
Original file line number Diff line number Diff line change
Expand Up @@ -17,35 +17,28 @@
"properties": {
"sample_sheet": {
"type": "string",
"description": "csv file with sample,nanopore fastq file,illumina R1 (optional),illuimina R2 (optional)",
"hidden": false
"description": "csv file with sample,nanopore fastq file,illumina R1 (optional),illuimina R2 (optional)"
},
"outdir": {
"type": "string",
"description": "Specifies where results are saved",
"hidden": false,
"default": "donut_falls"
},
"sequencing_summary": {
"type": "string",
"description": "input channel for nanopore sequencing summary file (optional)",
"hidden": false
"description": "input channel for nanopore sequencing summary file (optional)"
}
}
},
"pipeline_configuration_options": {
"title": "Pipeline Configuration options",
"type": "object",
"description": "Options to configure how the workflow runs.",
"required": [
"assembler"
],
"properties": {
"assembler": {
"type": "string",
"description": "Specifies which assembler is/assemblers are going to be used.",
"default" : "flye",
"hidden": true
"default" : "flye"
}
}
},
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