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TraCeR v0.3.0
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@mstubb mstubb released this 14 Mar 11:40
· 292 commits to master since this release
v0.3.0
a20fd9a

This release contains a way to test your installation and setup, improved output files from summarise and bug fixes.

Test data

A new tracer test function (see README for details) runs all the steps of assemble and summarise using a small test data set. This will help to check whether all of the prerequisites are working and if config file is correct.

Summarise output

The summarise output now includes the following:

  1. A recombinants.txt file that details the recombinants that were reconstructed in each cell.
  2. Text files containing the underlying data for the reconstructed lengths and clonotype size graphs.
  3. Labelled axes on the reconstructed lengths and clonotype size graphs.
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