Removing extra storage files and merge issues

SchlossLab · Oct 14, 2024 · b93d89a · b93d89a
1 parent dc9c807
commit b93d89a
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Showing 22 changed files with 0 additions and 3,216 deletions.
diff --git a/src/CountTableAdapter.cpp b/src/CountTableAdapter.cpp
@@ -116,12 +116,6 @@ std::string CountTableAdapter::GetNameByIndex(const int index) const {
     return sampleNames[index];
 }
 
-std::string CountTableAdapter::GetNameByIndex(const int index) const {
-    if(index > static_cast<int>(sampleNames.size()))
-        return "";
-    return sampleNames[index];
-}
-
 std::vector<std::string> CountTableAdapter::GetGroups() const {
     return groups;
 }

diff --git a/src/Makevars b/src/Makevars
@@ -1,3 +1,2 @@
 # Makevars
 CXX_STD = CXX11
-# PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) -lprofiler
diff --git a/tests/testthat/extdata/Clustur/amazon_subset.dist b/tests/testthat/extdata/Clustur/amazon_subset.dist
diff --git a/tests/testthat/extdata/Clustur/count_table.count b/tests/testthat/extdata/Clustur/count_table.count
diff --git a/tests/testthat/extdata/Clustur/modifed_amazon.csv b/tests/testthat/extdata/Clustur/modifed_amazon.csv
diff --git a/tests/testthat/extdata/Clustur/sparse_amazon.RDS b/tests/testthat/extdata/Clustur/sparse_amazon.RDS
diff --git a/tests/testthat/extdata/Clustur/sparse_phylip.nn.list b/tests/testthat/extdata/Clustur/sparse_phylip.nn.list
diff --git a/tests/testthat/extdata/Clustur/sparse_phylip.opti_mcc.list b/tests/testthat/extdata/Clustur/sparse_phylip.opti_mcc.list
diff --git a/tests/testthat/extdata/Clustur/sparse_phylip.opti_mcc.sensspec b/tests/testthat/extdata/Clustur/sparse_phylip.opti_mcc.sensspec
diff --git a/tests/testthat/extdata/Clustur/sparse_phylip.opti_mcc.steps b/tests/testthat/extdata/Clustur/sparse_phylip.opti_mcc.steps