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[SYNR-1536] enable multi threads #343

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@allaway
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allaway commented Dec 11, 2024

Upon further testing, I think this does cause issues. When knitting an Rmarkdown file that contains a synTableQuery, it seems to stall at 0% downloaded. Reverting to the current released version of synapser fixed the issue.

sessionInfo()

R version 4.3.3 (2024-02-29)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS Sonoma 14.1

Matrix products: default
BLAS:   /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib 
LAPACK: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib;  LAPACK version 3.11.0

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

time zone: America/Chicago
tzcode source: internal

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] gtable_0.3.6           rjson_0.2.21           xfun_0.49              ggplot2_3.5.1         
 [5] remotes_2.5.0          ggrepel_0.9.6          rstatix_0.7.2          lattice_0.22-6        
 [9] tzdb_0.4.0             vctrs_0.6.5            tools_4.3.3            generics_0.1.3        
[13] curl_6.0.0             tibble_3.2.1           fansi_1.0.6            pkgconfig_2.0.3       
[17] Matrix_1.6-5           EnhancedVolcano_1.20.0 lifecycle_1.0.4        compiler_4.3.3        
[21] stringr_1.5.1          munsell_0.5.1          carData_3.0-5          htmltools_0.5.8.1     
[25] yaml_2.3.10            Formula_1.2-5          pillar_1.9.0           car_3.1-3             
[29] ggpubr_0.6.0           tidyr_1.3.1            viridis_0.6.5          abind_1.4-8           
[33] tidyselect_1.2.1       digest_0.6.37          stringi_1.8.4          dplyr_1.1.4           
[37] purrr_1.0.2            WriteXLS_6.7.0         cowplot_1.1.3          fastmap_1.2.0         
[41] grid_4.3.3             colorspace_2.1-1       cli_3.6.3              magrittr_2.0.3        
[45] utf8_1.2.4             broom_1.0.7            readr_2.1.5            scales_1.3.0          
[49] backports_1.5.0        rmarkdown_2.29         httr_1.4.7             reticulate_1.39.0     
[53] gridExtra_2.3          ggsignif_0.6.4         png_0.1-8              hms_1.1.3             
[57] evaluate_1.0.1         knitr_1.49             viridisLite_0.4.2      rlang_1.1.4           
[61] Rcpp_1.0.13-1          glue_1.8.0             rstudioapi_0.17.1      jsonlite_1.8.9        
[65] R6_2.5.1               enrichR_3.2   

@thomasyu888
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Thanks @allaway , I wonder if that is a Python or R issue. Will have to dig deeper.

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