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Fix broken build toolchain #209

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merged 3 commits into from
Apr 12, 2024
Merged

Fix broken build toolchain #209

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593321f
use new setup-miniconda version
alchem0x2A Apr 12, 2024
e28da80
pin conda-build and boa version
alchem0x2A Apr 12, 2024
a413f88
Merge pull request #7 from alchem0x2A/build-fix
alchem0x2A Apr 12, 2024
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8 changes: 4 additions & 4 deletions .github/workflows/build-test.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -20,19 +20,19 @@ jobs:

steps:
- uses: actions/checkout@v3
- uses: conda-incubator/setup-miniconda@v2
- uses: conda-incubator/setup-miniconda@v3
with:
python-version: "3.10"
activate-environment: sparc-test
conda-build-version: ">=3.20"
conda-build-version: "24.3.0"
#mamba-version: "*"
miniforge-variant: "Mambaforge" # Fix according to https://github.com/nextstrain/cli/commit/4a764976519ca5c540c745463548a9d883eae079
channels: conda-forge,defaults
channel-priority: true
- name: Install boa dependencies
run: |
mamba install -c conda-forge pip "conda-build>=3.20" "colorama=0.4" "ruamel=1.0" "ruamel.yaml=0.17" "rich=13.6" "mamba=1.5" "jsonschema=4.19"
pip install git+https://github.com/mamba-org/boa.git@81dc74a9974ecd02494b300fb97a0a7b2f186afc
mamba install -c conda-forge pip "conda-build=24.3.0" "colorama=0.4" "ruamel=1.0" "ruamel.yaml=0.17" "rich=13.6" "mamba=1.5" "jsonschema=4.19"
pip install git+https://github.com/mamba-org/boa.git@00a11ffce59f47c0fc576f93d39baf1f8fc92f32
- name: Build with mambabuild
run: |
echo $CONDA_PREFIX
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