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24 changes: 24 additions & 0 deletions @export/models.d.ts
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// export R# package module type define for javascript/typescript language
//
// imports "models" from "biocad_registry";
//
// ref=biocad_registry.models@biocad_registry, Version=1.0.0.0, Culture=neutral, PublicKeyToken=null

/**
*/
declare namespace models {
/**
*/
function enzyme(biocad_registry: object, ec_number: string): any;
/**
* @param env default value Is ``null``.
*/
function enzyme_function(biocad_registry: object, enzyme_id: string, ec_number: string, metabolites: any, env?: object): any;
/**
*/
function subcellular_location(biocad_registry: object, name: string, topology: string): object;
/**
* @param desc default value Is ``''``.
*/
function vocabulary_id(biocad_registry: object, term: string, category: string, desc?: string): object;
}
8 changes: 8 additions & 0 deletions man/biocad_registry/models/models.md
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# models



+ [vocabulary_id](models/vocabulary_id.1)
+ [subcellular_location](models/subcellular_location.1)
+ [enzyme_function](models/enzyme_function.1)
+ [enzyme](models/enzyme.1)
13 changes: 13 additions & 0 deletions man/biocad_registry/models/models/enzyme.1
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.\" man page create by R# package system.
.TH MODELS 1 2000-Jan "enzyme" "enzyme"
.SH NAME
enzyme \-
.SH SYNOPSIS
\fIenzyme(\fBbiocad_registry\fR as <generic> biocad_registry,
\fBec_number\fR as string);\fR
.SH SEE ALSO
models
.SH FILES
.PP
biocad_registry.dll
.PP
16 changes: 16 additions & 0 deletions man/biocad_registry/models/models/enzyme_function.1
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.\" man page create by R# package system.
.TH MODELS 1 2000-Jan "enzyme_function" "enzyme_function"
.SH NAME
enzyme_function \-
.SH SYNOPSIS
\fIenzyme_function(\fBbiocad_registry\fR as <generic> biocad_registry,
\fBenzyme_id\fR as string,
\fBec_number\fR as string,
\fBmetabolites\fR as any,
[\fB<Environment>\fR]);\fR
.SH SEE ALSO
models
.SH FILES
.PP
biocad_registry.dll
.PP
14 changes: 14 additions & 0 deletions man/biocad_registry/models/models/subcellular_location.1
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.\" man page create by R# package system.
.TH MODELS 1 2000-Jan "subcellular_location" "subcellular_location"
.SH NAME
subcellular_location \-
.SH SYNOPSIS
\fIsubcellular_location(\fBbiocad_registry\fR as <generic> biocad_registry,
\fBname\fR as string,
\fBtopology\fR as string);\fR
.SH SEE ALSO
models
.SH FILES
.PP
biocad_registry.dll
.PP
15 changes: 15 additions & 0 deletions man/biocad_registry/models/models/vocabulary_id.1
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.\" man page create by R# package system.
.TH MODELS 1 2000-Jan "vocabulary_id" "vocabulary_id"
.SH NAME
vocabulary_id \-
.SH SYNOPSIS
\fIvocabulary_id(\fBbiocad_registry\fR as <generic> biocad_registry,
\fBterm\fR as string,
\fBcategory\fR as string,
\fBdesc\fR as string = "");\fR
.SH SEE ALSO
models
.SH FILES
.PP
biocad_registry.dll
.PP
178 changes: 178 additions & 0 deletions vignettes/biocad_registry/models.html
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<!DOCTYPE html><html lang="zh-CN">
<head>
<meta http-equiv="content-type" content="text/html; charset=UTF-8" />
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, minimum-scale=1.0, maximum-scale=1.0" />
<title>models</title>
<meta name="author" content="[email protected]" />
<meta name="copyright" content="SMRUCC genomics Copyright (c) 2022" />
<meta name="keywords" content="R#; models; biocad_registry" />
<meta name="generator" content="https://github.com/rsharp-lang" />
<meta name="theme-color" content="#333" />
<meta name="description" content="..." />
<meta class="foundation-data-attribute-namespace" />
<meta class="foundation-mq-xxlarge" />
<meta class="foundation-mq-xlarge" />
<meta class="foundation-mq-large" />
<meta class="foundation-mq-medium" />
<meta class="foundation-mq-small" />
<meta class="foundation-mq-topbar" />
<style>

.table-three-line {
border-collapse:collapse; /* 关键属性:合并表格内外边框(其实表格边框有2px,外面1px,里面还有1px哦) */
border:solid #000000; /* 设置边框属性;样式(solid=实线)、颜色(#999=灰) */
border-width:2px 0 2px 0px; /* 设置边框状粗细:上 右 下 左 = 对应:1px 0 0 1px */
}
.left-1{
border:solid #000000;border-width:1px 1px 2px 0px;padding:2px;
font-weight:bolder;
}
.right-1{
border:solid #000000;border-width:1px 0px 2px 1px;padding:2px;
font-weight:bolder;
}
.mid-1{
border:solid #000000;border-width:1px 1px 2px 1px;padding:2px;
font-weight:bolder;
}
.left{
border:solid #000000;border-width:1px 1px 1px 0px;padding:2px;
}
.right{
border:solid #000000;border-width:1px 0px 1px 1px;padding:2px;
}
.mid{
border:solid #000000;border-width:1px 1px 1px 1px;padding:2px;
}
table caption {font-size:14px;font-weight:bolder;}
</style>
</head>
<body>
<table width="100%" summary="page for {models}">
<tbody>
<tr>
<td>{models}</td>
<td style="text-align: right;">R# Documentation</td>
</tr>
</tbody>
</table>
<h1>models</h1>
<hr />
<p style=" font-size: 1.125em; line-height: .8em; margin-left: 0.5%; background-color: #fbfbfb; padding: 24px; ">
<code>
<span style="color: blue;">require</span>(<span style="color: black; font-weight: bold;">CellRender</span>);
<br /><br /><span style="color: green;">{$desc_comments}</span><br /><span style="color: blue;">imports</span><span style="color: brown"> "models"</span><span style="color: blue;"> from</span><span style="color: brown"> "biocad_registry"</span>;
</code>
</p>
<p></p>
<blockquote>
<p style="font-style: italic; font-size: 0.9em;">

</p>
</blockquote>
<div id="main-wrapper">
<table class="table-three-line" style="display: block">
<caption>.NET clr type export</caption>
<tbody><tr>
<td id="reaction_node">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/reaction.html">reaction_node: reaction</a>
</td>
<td></td>
</tr>
<tr>
<td id="reaction_graph">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/reaction_graph.html">reaction_graph: reaction_graph</a>
</td>
<td></td>
</tr>
<tr>
<td id="molecules">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/molecule.html">molecules: molecule</a>
</td>
<td></td>
</tr>
<tr>
<td id="dblinks">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/db_xrefs.html">dblinks: db_xrefs</a>
</td>
<td></td>
</tr>
<tr>
<td id="subcellular_compartments">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/subcellular_compartments.html">subcellular_compartments: subcellular_compartments</a>
</td>
<td></td>
</tr>
<tr>
<td id="subcellular_locations">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/subcellular_location.html">subcellular_locations: subcellular_location</a>
</td>
<td></td>
</tr>
<tr>
<td id="vocabulary">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/vocabulary.html">vocabulary: vocabulary</a>
</td>
<td></td>
</tr>
<tr>
<td id="pathway">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/pathway.html">pathway: pathway</a>
</td>
<td></td>
</tr>
<tr>
<td id="complex">
<a href="/vignettes/clr/biocad_registry/biocad_registryModel/complex.html">complex: complex</a>
</td>
<td></td>
</tr>
<tr>
<td id="biocad_registry">
<a href="/vignettes/clr/biocad_registry/biocad_registry.html">biocad_registry: biocad_registry</a>
</td>
<td></td>
</tr>
<tr>
<td id="cad_registry">
<a href="/vignettes/clr/biocad_registry/biocad_registry.html">cad_registry: biocad_registry</a>
</td>
<td></td>
</tr></tbody>
</table>
<br />
<br />
<table class="table-three-line">
<caption>.NET clr function exports</caption>
<tbody><tr>
<td id="vocabulary_id">
<a href="./models/vocabulary_id.html">vocabulary_id</a>
</td>
<td></td>
</tr>
<tr>
<td id="subcellular_location">
<a href="./models/subcellular_location.html">subcellular_location</a>
</td>
<td></td>
</tr>
<tr>
<td id="enzyme_function">
<a href="./models/enzyme_function.html">enzyme_function</a>
</td>
<td></td>
</tr>
<tr>
<td id="enzyme">
<a href="./models/enzyme.html">enzyme</a>
</td>
<td></td>
</tr></tbody>
</table>
</div>
<hr />
<div style="text-align: center;">[<a href="../index.html">Document Index</a>]</div>
</body>
</html>
67 changes: 67 additions & 0 deletions vignettes/biocad_registry/models/enzyme.html
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<!DOCTYPE html>
<html>

<head>
<title>enzyme</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
<div class="container">

<table style="width: 100%;">
<tr>
<td>enzyme {models}</td>
<td style="text-align: right;">R Documentation</td>
</tr>
</table>

<h2>enzyme</h2>

<h3>Description</h3>

enzyme

<h3>Usage</h3>

<div style="width: 100%; padding-left: 3%; color: black;">
<pre><code class='language-R' style="color: black; font-weight:normal;"><strong>enzyme</strong>(<i>biocad.registry</i>, <i>ec.number</i>);</code></pre>
</div>

<h3>Arguments</h3>

<table>

</table>


<h3 style="display: none;">Details</h3>



<h3 style="display: block">Authors</h3>

biocad_registry

<h3>Value</h3>

this function returns data object of type <i>any</i> kind.<h4>clr value class</h4><ul><li><i>any</i> kind</li></ul>

<h3 style="display: none;">Examples</h3>



<hr />
<div style="text-align: center;">[Package <em>models</em> version 1.0.0.0 <a
href="../models.html">Index</a>]
</div>
</div>
</body>

<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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